Pseudomonas hefeiensis: PSH57_13080
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Entry
PSH57_13080 CDS
T09985
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
phef
Pseudomonas hefeiensis
Pathway
phef02025
Biofilm formation - Pseudomonas aeruginosa
phef03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PSH57_13080 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSH57_13080 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
phef02044
]
PSH57_13080 (tssH)
Secretion system [BR:
phef02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSH57_13080 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
Clp_N
AAA_16
AAA_22
nSTAND3
Zeta_toxin
AAA_7
ResIII
AAA_14
AAA_25
T2SSE
ClpB_D2-small
IstB_IS21
Sigma54_activat
NACHT
SRP54
AAA_23
FtsK_SpoIIIE
AAA_24
IPT
DUF1192
Motif
Other DBs
NCBI-ProteinID:
WLH15165
LinkDB
All DBs
Position
complement(2955412..2957955)
Genome browser
AA seq
847 aa
AA seq
DB search
MELASLIGRLNPDNRRALERAAQRCLQRSHHYVEIEHLLLELLDIEGGDFACLLPRFGLE
RDAVAAEINKALELFKSGSTRTPALSTQTIGLLEDAVVQASVLGLDSIRSGLLLLALLDR
DERRSLLLNSASSLLRIPREALRAHLLEWTESSREHVGGVRPTKPGEVPQKQDPVLDQYT
QDLTADARDGRIDPIVGRDGEIRQCIDILLRRRQNNPILVGAPGVGKTAVVEGLALRIAA
GDVPPSLQEVTLRVLDLGLLQAGAGVKGEFEQRLKGVIDAVRSAEKPIILFIDEAHTLIG
AGGAEGGSDAANLLKPALARGELRTLAATTWLEYKKYFEKDPALARRFQLVQVEEPDELT
AVEMLRGVATKLEQHHGVHVLDAAIQEAVKLSHRYISGRQLPDKAISVLDTACARVALGQ
HDVPPPLESLRHRQNSLKDEVERLRREQATGLDHRERITLLEAESGGNVQAIRELETRWG
EEREAVRELLDTRRELLALSERADGEKPDTEIDNRIDHLAAELLRLEAGLDAIRQDDPLV
PEQVDSKTVAAVIAGWTGIPVGKMLADEAHAVRTLGQRMGLRVMGQDTALNTIAQRLQAY
RAGLTDPQKPVGVFLLVGPTGVGKTETAYALADALYGGERNLISINLSEYQEAHTVSQLK
GAPPGYVGYGSGGVLTEAVRRKPYSVVLLDEIEKAHPDVLEAFYNVFDKGLMEDGTGLVV
DFKNTVMLATSNVGAELLLDTPAAQLGSDAFNEALHTVLLQAFRPAFLARMTVVAYRPLD
EATLEGIVLAKLEKLRGRYKAATGKQFEFDAGIVKAVLAKCSAAGARDVENVLMTQVTGK
LAEWVLE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggaactggccagcctgatcggacgcctcaacccggacaaccgtcgcgccctggaacgc
gctgcgcaacgctgcctgcaacgcagccatcactatgtggaaatcgagcacctgctattg
gaactgctggacatcgaaggcggtgacttcgcctgcctgctgccgcgcttcggcctggag
cgcgacgcggtggcggcagaaatcaacaaggccctggagttgttcaaatccggcagcacc
cgcacgccggccctgtcgacgcaaaccattggcctgctggaagacgccgtagtccaggcc
agcgtgctgggcctggacagcatccgttccggcttgttgttgctggcgctgctggaccgt
gatgagcgtcgcagcctgttgctcaacagcgcctcatcgctgctgcgcattccccgggag
gccctgcgcgctcatctgctggaatggaccgaaagctctcgggaacatgtcggcggtgtg
cgcccgacaaagcccggtgaggtgccacagaaacaggacccggtgctcgaccagtacacc
caggacctgaccgccgacgcccgggacggacgcatcgaccccatcgtcgggcgcgacggt
gagattcgtcagtgcatcgatatcctgctcaggcgtcggcagaacaaccctatcctggtg
ggcgcgccgggtgttggcaagaccgccgtggtggaaggcctggccctgcgcatcgccgcc
ggtgacgtgcccccgtcattgcaggaggtcacgttgcgcgtgctggatctgggcctgttg
caggccggcgcgggtgtcaagggcgagttcgaacagcggctcaaaggcgtgatcgacgcc
gtgcgcagcgctgaaaaaccgatcattctgtttatcgacgaagcccataccctgatcggt
gccggcggcgccgaaggtggcagcgatgcggccaacctgctcaaaccggccttggcccgg
ggcgaactacgcaccctggccgccaccacctggctggaatacaaaaaatacttcgagaaa
gacccggccctggctcgtcgtttccaactggtgcaggtcgaagaaccggacgaactcacc
gccgtggaaatgctccgtggcgtggcgaccaaactggaacaacaccacggcgtacatgtg
ttggacgcggccattcaggaagcggtgaaattgtcccaccgctacatttccgggcgacaa
ttgccggacaaagccatcagcgtgctcgacactgcctgcgcccgggtcgccctcggccaa
cacgatgtgccgccgccgctggaaagcctgcgccaccgccagaacagcctcaaggacgaa
gtcgaacgcttgcgccgtgaacaggccaccgggctggatcaccgcgagcgcatcaccctg
ctggaagcagagtcgggcggtaacgtgcaggccatccgcgagctggagacccgttggggc
gaagagcgcgaagcggtgcgcgaactgctcgacacccgccgcgaactgctggccttgagc
gaacgcgccgacggtgaaaagcccgacaccgagatcgataaccgcatcgaccacctggcc
gccgaactgctgcgtctggaggccggcctggatgccattcgccaggacgatccgctggtg
cccgaacaggtggacagcaagaccgtcgccgccgtgatcgccggctggaccggcattccg
gtaggcaagatgctcgccgacgaagcccacgccgtgcgcaccctcggccagcgcatgggc
ctgcgggtgatgggccaggacaccgcgttgaacaccatcgcccagcgcctgcaagcctac
cgcgccggcctgaccgacccgcagaaaccggtcggcgtgttcctgctggtgggccccacc
ggcgtgggcaagaccgaaaccgcctacgccctggccgatgccttgtatggcggcgaacgc
aacctgatcagcatcaacctttcggaataccaggaagcccacaccgtcagccaactcaaa
ggcgccccgcccggctatgtcggctacggcagcggcggtgtgctcaccgaagcggttcgg
cgcaaaccctattcggtagtgttgctggatgaaatcgaaaaggcccacccggatgtgctc
gaggccttctataacgtcttcgacaaaggcctgatggaagacggcaccggcctggtggtg
gacttcaagaacacggtgatgctcgccaccagcaacgtcggcgccgaactgctactggac
acgccggccgcgcagttgggcagcgacgccttcaacgaagccttgcatacagtgttgctg
caagcgtttcgacccgcctttctagcgcgcatgacggtggtggcgtatcggccgctggat
gaggcgacgctggaagggatcgtgctggcaaagctggagaaattgcgtgggcgctacaag
gctgcgaccggcaagcaattcgagttcgatgcggggatcgtcaaggccgtgttggccaaa
tgcagcgcggcgggggcacgggacgtcgagaatgtgttgatgacgcaggtgacggggaag
ttggcggagtgggtgttggagtga
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