Pseudomonas hefeiensis: PSH57_13120
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Entry
PSH57_13120 CDS
T09985
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
phef
Pseudomonas hefeiensis
Pathway
phef02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSH57_13120 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
phef02044
]
PSH57_13120 (tssK)
Secretion system [BR:
phef02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSH57_13120 (tssK)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
DUF7019
Motif
Other DBs
NCBI-ProteinID:
WLH15173
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All DBs
Position
2964692..2966023
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AA seq
443 aa
AA seq
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MSLLPDAVCWHEGMQLLPQHFQLQGLRAEALAAHFASACNPWFWGVSQLEVDPSALSAGQ
VRLLQLQGTLPDGLPVNLQAGVGPTLELDITEAVNKTDDATVTVYLAISPLWRAGQLLPL
KGRLQSVVGDALPDLTSGEFPESITVWRPNPRLCTQLSKADSICLPLLRIRKEGGGFLRA
AYTPPTPILLPESILGRRVAGLCARAREKCLFLAGRLRQAEAAGNQDDAMEIRRQLTALW
ARLPEVEGALNTRVATPQALHGLLLGLAGSWSALDLLAGVPAFAPLDFLELQRGYEPLLD
WLEDTLERIRAGYRSLAFERNDPVFSIQLPGDQPSQRLVIGLRMPNGASEQAAAEWLRGA
IIASAPHIPLLSRQRMSGLPHQAMSRNEQVAYSVGDDTRLFVVAAGGQWFDGQLPLHIVA
PASHQASSPWQVVLFVAQTGESA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttacctgacgcggtttgctggcatgagggcatgcagttgctgccccagcat
ttccaattgcaagggctgcgcgccgaggccctggccgcgcattttgccagtgcctgcaac
ccgtggttctggggtgtcagccagctggaagtcgacccttcagccctcagcgccggacag
gtccggctgttgcaactgcagggcaccttgccggacgggttaccggtcaatttgcaggcc
ggtgtcgggccgaccctcgagctggacatcaccgaggcggtgaacaagaccgacgacgcg
acggtgactgtgtacctggccatcagcccgctctggcgcgctgggcaattgctgccactc
aagggacggctgcaatcggtcgtgggtgacgccttgccggatctcaccagcggcgaattc
cccgagtccattacggtgtggcggccgaaccctcggctgtgcacacaactgagcaaggcc
gactcgatctgcctgccactgttgcgcatccgcaaggagggcggtggcttcctgcgggcg
gcctacacaccgccaacgccgattctgttaccggaatcgattctcggtcggcgagtggcc
gggttatgcgccagggctcgggagaaatgtttgttcctggccgggcgccttcgtcaggcc
gaggcggccggcaaccaggacgatgcaatggagattcgccgccaattgactgcgttgtgg
gcgcgattgccggaagtcgaaggcgcgctgaacacccgggtggcgacaccccaggcgttg
catggtctgctgttgggcctggccggtagctggtcggcgctcgatctgctggcgggtgtc
ccggccttcgcgccgctggattttcttgagctgcagcgcggctatgaaccgctgctcgac
tggctggaagacaccctggagcggatccgcgccggctatcgcagcctggccttcgaacgc
aatgacccggtgttctctatccagttgcccggcgaccagccgagccagcgcctggtgatc
ggtctgcgcatgcccaacggcgccagtgagcaggctgcggccgaatggctgcgcggggca
atcatcgcgtccgcgccgcacatcccgctgttgagtcgccaacgcatgagcgggctgccc
catcaggccatgagccgcaacgaacaggtggcctacagcgtgggtgacgacacccggttg
ttcgtggtggccgccggtgggcaatggtttgacgggcaattgccgttgcacatcgtagcg
ccagcctcgcatcaggccagcagtccatggcaggtggtgttgtttgtggcgcagaccggt
gaaagcgcctga
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