KEGG   Pseudomonas hefeiensis: PSH57_13130
Entry
PSH57_13130       CDS       T09985                                 
Name
(GenBank) type VI secretion protein IcmF/TssM N-terminal domain-containing protein
  KO
K11891  type VI secretion system protein ImpL
Organism
phef  Pseudomonas hefeiensis
Pathway
phef02025  Biofilm formation - Pseudomonas aeruginosa
phef03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:phef00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PSH57_13130
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PSH57_13130
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:phef02044]
    PSH57_13130
Secretion system [BR:phef02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PSH57_13130
SSDB
Motif
Pfam: IcmF-related_N BatA
Other DBs
NCBI-ProteinID: WLH15175
LinkDB
Position
2966800..2970621
AA seq 1273 aa
MSFLSIVALVLLALVAVLLIAAAIWWLRTQGGAAIRSFYGAVRHMEQEQGTRDRYQMPWL
LMLGNEADGAQLCAQWRLQPTDKAAWFGRWWSDAEGAVLVVPQALFLPDEGMNMQRGNWW
RLLGLIVRLRSRRPLDAVIWTVPFGKLDDIEQTTELSLKVRRCFIDLLQRFGLSLPVYVV
ITGMEELPGFQELVSALPAQARESTLGWSSPYAPDAAWQSQWSDQALDQVNAALSQSIIE
IGALAGQLSSDLYGLPERFEGLRRALQLLLEPVFQGNAQGEAPHFRGVYFTASQAPAVTG
DGLSASDSVVRQTVFARQLWSRRLVAERGLAQPVPRLLRLRQRWHRLAGGVALVVGVVWL
GSMVWVWHDSVEQAEGLSRLVLSAHKNHVVVDPDKPQLEPTRHNVQNYWNVLEKAPRWRF
VSVVFPTSWFSSVDAQLDNGLRMTARHHWILPLRDLLASDLEQLKGIRNTERRGNVESED
PAQWQSYVKAKDLVERAVRLEQHNQMFSQAVNNPKAPLDELVQLSNNALSLNLNTGTLSR
ARFYNRVLFDAQNADLKGLDLNAARPVIADNFMGLMQRWLDHYFLADNFVRQAGYLKLHL
QRLEAGGGNSLSELEELMALVDDLQRLVSLTNSAWGRGKGQDLVPGYTQLMDKVGHSTLL
GPDLEQDLQSQAAKLQQSFRDQWIVQTGSRDNLLIQQGSGLLVLQEHVTALDGAVQALFK
RDFVALAMQKAPSDSNGVSMGRGDSDDFSVALNYFASYQSYANEELPRIPPDYRGALMEA
AESAAARAMWLSLDESEQPLPGMSFNVQTSQAVSLQKAFMDVNRSDLAIRFQRLLNRRAL
AQIKSGLNEIDAQPLFTQRTDIQRWDGSKNFGLQLYGATDPQDLKLSLNQQFGAMLQIAE
HRMPALEWLIVQQDNLSALEHDQVARFMALNDELLKYKNQNPASAAAQLEQLVSRDFIEM
DTTSCGQILQTSSLPGGRGDLALRTVTLQQSALQRCLYLQQNQAATAWNDLANYFNQYLA
GRFPFSQDVRARDADPARVQRLLELIDTRLPQAQAGLALSRTPERLAAEDFLNRLKQAGA
WLGPLFVRDKSGLLGVEMDVRWRTDREQERGADQVIAWGLNAGNQQISYPGETGQNLRWM
VGQPMSLTLRWARNGYQRPANDPLQPDLVVRDLEAGWEYQGPWSLLRLMRSLVSSQRQPN
ADYTDFPLTLQLPVTAQTQATTAQQTLMFLRLSLMSQGSKLPLSIPPLPTQAPRSPFMAT
SSSPAIATREEGL
NT seq 3822 nt   +upstreamnt  +downstreamnt
atgagcttcttgagcatcgtcgccctggtgttgctggcccttgtcgcggtgctgctgatt
gcggccgcgatttggtggctgcgcacccagggcggcgcggccatccgcagcttctatggg
gcggtgcgccacatggagcaggagcagggcacccgggaccgctaccagatgccctggttg
ttgatgctgggcaacgaggccgacggcgcgcagttgtgcgcccagtggcgtttgcagccg
acagacaaggcggcgtggttcgggcgctggtggtcggatgccgaaggcgcggtgctggtg
gtgccccaggcgctgtttttgcccgatgagggcatgaacatgcaacggggcaactggtgg
cgcctgttgggattgattgtgcgtctgcgcagcagacggccgctggatgctgtgatctgg
accgtcccgttcggcaagctcgatgacatcgagcagacgaccgagctgagtctcaaggtt
cggcgctgtttcatcgaccttctgcaacggttcggtctgagtttgccggtgtatgtggtg
atcaccgggatggaggaactgccagggtttcaggaactggtgagtgcgttgcccgcccag
gcccgggaatcgacgctgggctggtcgtcgccatacgcgcccgatgcagcatggcaatca
caatggagcgatcaggcgctggaccaggtcaacgccgcgttgtcccagtcgatcatcgaa
atcggtgcgctggcggggcaactgagcagcgacctgtatgggttgccggagcgtttcgag
gggttgcggcgagccttgcagttgttgctggaaccggtttttcagggcaacgctcagggg
gaggcgccgcactttcgcggcgtgtatttcaccgccagccaggcgccggctgtcaccggc
gatggcttatccgccagcgacagcgttgtgcgccaaacggtgttcgcccggcaactgtgg
tcgcgccggctggtagccgagcggggcctggcccagccggtgccacgcctgctgcgcttg
cgccaacgctggcatcggctggccggaggagtggcgctggtggtcggcgtggtctggctg
gggagcatggtctgggtctggcacgattctgtcgagcaagccgaggggctgtcgcggttg
gtcctcagcgcgcacaaaaaccatgtcgtggtcgatcccgacaaacctcaactggaaccg
acccgacacaacgtgcagaactactggaacgtgctggaaaaagccccgcgctggcgtttc
gtctcggtggtgtttccgacttcctggttctcttccgtggacgcacagctggacaacggg
ttgcgcatgaccgcccgccatcattggatattgccgctgcgtgacctgctggcctcggac
ctcgaacagctcaagggcatccgcaataccgagcggcgcggcaacgtggaaagcgaagac
ccggcgcaatggcaaagttacgtaaaggccaaggacctggttgaacgcgcggtgcgcctg
gaacagcacaaccaaatgttcagccaggcggtgaacaatcccaaggcgccgctggacgag
ctggtgcaactgagcaacaacgccctgtcgctgaacctcaacaccgggaccttgagtcgg
gcgcgtttctacaatcgtgtgctgttcgatgcccagaatgccgatttgaaaggcctggac
ctgaacgccgcgcgcccggtgattgccgataacttcatgggcctgatgcagcgctggctg
gatcattactttctggcggacaacttcgtgcgccaggccggctacttgaagctgcatctg
caacggctagaggcgggcggtggcaactccttgagtgaactcgaagagctgatggcgttg
gtcgatgacctgcagcggctcgtcagcctgaccaactcggcctggggccggggcaaggga
caggacctggtgcccggttacacccagttgatggacaaggtgggccacagcacgctgctg
gggccggatcttgagcaggatctgcagagccaggcggcaaaattgcagcagagctttcgc
gaccagtggatcgtccagaccggttccagggacaatctgttgatccagcagggcagcggt
ttgctggtgctgcaggagcatgtcacggcactggacggcgcggtgcaagcgctgttcaag
cgtgatttcgtggcgttggccatgcagaaggcgccgtcggacagtaacggcgtctcgatg
ggccggggtgacagcgacgatttcagcgttgccctgaactacttcgccagctaccagagc
tacgccaatgaagagttgccgcgcatcccgccggattaccgtggggcgctgatggaggcc
gctgaaagcgcggcggcgcgggccatgtggctgagtctggatgaaagcgagcaaccgcta
ccgggcatgagtttcaatgtgcagacctcccaggccgtttccctgcaaaaagccttcatg
gatgtgaaccgcagcgatctggcgattcgttttcagcgcctgctcaaccgccgagcgttg
gcacagatcaagagtggcctgaacgaaatcgacgcccagccactgtttactcaacgcacc
gatatccagcgctgggacggttcgaagaacttcggtttgcagttgtacggcgcgactgat
cctcaggacttgaagctgagcctgaaccagcagttcggcgccatgcttcagatcgccgag
caccgcatgcccgcgctggaatggctgattgtccagcaggacaacctgtcggccctggag
cacgatcaggttgcccggtttatggcgctcaacgacgaactgctcaaatacaaaaaccag
aacccggccagtgcggctgcccaacttgagcaattggtaagccgcgacttcatcgaaatg
gacaccacgtcctgcgggcagattctgcaaacttccagcctgcccggcggacgtggcgac
ctggctctgcgcaccgtcacgctgcaacaaagcgccttgcaacggtgcctgtatctgcaa
cagaaccaggcggcgaccgcctggaatgatctggccaattatttcaatcagtacctggcc
gggcgttttccgttttcccaggatgtgcgggcccgcgatgccgacccggctcgggtacaa
cgcctgctggagctgatcgacacgcgactgccccaggcacaggctgggctggcgttgagc
cggacgccggagcgattggcggcggaggattttctcaaccgtttgaaacaggccggtgcc
tggctcgggccgttgttcgtgcgcgacaagagtggcttgctcggcgtggaaatggacgtg
cgctggcgaaccgaccgcgagcaggagcgcggcgcggatcaggtgatcgcctgggggctg
aacgccggcaaccaacagatcagttaccctggtgaaaccgggcagaacttgcgctggatg
gtcgggcagccgatgagtttgaccttgcgctgggcccgcaacggttaccagcgtccggcc
aacgacccgttacaacccgatctggtggttcgtgacctggaagccggttgggagtaccag
gggccgtggtcgttgttgcgcctgatgcgctcattggtgtcgagccagcgtcagccgaat
gccgactacactgacttcccgctgactctgcaactgcccgtgacggctcagacccaggcg
accacggcgcagcagaccctgatgttcctgcgtttgtcgctgatgagccagggctcgaag
ctgccgctgtcgatcccgccactgccaacccaggcaccccgttcacctttcatggcgacc
tcatcgagccccgccatcgcaacccgcgaggagggtttgtga

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