Pseudomonas hefeiensis: PSH57_13385
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Entry
PSH57_13385 CDS
T09985
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
phef
Pseudomonas hefeiensis
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phef03400
]
PSH57_13385
DNA repair and recombination proteins [BR:
phef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSH57_13385
Archaeal homologous recombinant proteins
PSH57_13385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WLH15221
LinkDB
All DBs
Position
complement(3029987..3031231)
Genome browser
AA seq
414 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQERDFEHACFLDWLLRQLTSEKPDVLLIAGDIFDTVNPPVKAQ
ERLYDFIVSAHEQNANLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDV
ERLLLPLPDAKGKVKAWCLALPFLRPAEVTGAQLGDDYLRGIGQVHEWLIAAANDKRKKG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGPSISYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYQHQILDVTLDGETLVKIEPRLIPRAVNLQRLGPAPLAEILVQL
KDLPDIDLLADAQRQPWLEVRVRLDEPQPDLRHQVETALQGKAVRLVRIAAEYAGSGGSA
GVDDGAALVELDQLSPQELFSRAWQDSYGNEVDEQTLKDFAVLLQDVQMEGEQP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgttccacacctccgactggcaccttgggcaaaacctgcacggccaggagcgc
gatttcgaacacgcctgtttccttgactggctgctgcgtcagttgaccagcgaaaaaccc
gacgtgctgctgattgccggcgatatcttcgacacggtgaacccgccggtcaaagcccag
gagcggctgtacgatttcatcgtcagcgcccatgaacaaaacgccaacctgaccattgtg
atgatcgccggcaaccacgactccggctcgcgcatcgaactgccggcgccgctgatgcgc
cggttacgcacgcatgccctgggccgggtgttgtggctggacgacgggcaactggacgtc
gagcgcctgctgctgccgctgcccgacgccaagggcaaggtcaaggcgtggtgcctggcc
ctgccgttcctgcggcctgccgaggtgaccggcgcacaactgggtgacgactacctgcgc
ggcatcggccaggttcatgagtggctgatcgccgccgccaacgacaagcgcaagaaaggc
caggcgctgatcgccatcagccatgcgcacatggccggcggctcggtgtccgaggattcc
gaacgcagcctgatcatcggcaacgccgaagccctgcccgccagcctgttcggcccgagc
atcagctacgtcgccctcggccatttgcacaagccgcaaaaggtcaacggcgaagagcgc
atccgctacagcggctcgccaattccgttgtcgttttcggaaatcggttatcagcatcag
atcctcgacgtcaccctggacggcgaaaccctggtcaagatcgagccgcggctgattccc
cgggccgtcaacctgcaacgactgggcccggcaccgctggccgagattctggtgcaactc
aaggacctgccggacatcgacctgttggccgatgcccagcgccagccctggctggaggtg
cgggtgcgcctcgatgagccgcagccagacctgcgccatcaagtggaaaccgccctgcaa
ggcaaagccgtgcgcctggtgcggatcgccgccgagtacgccggcagcggcggcagcgca
ggcgttgatgacggcgccgcgctggtcgaactggatcagttgagcccgcaggaattgttc
agccgcgcctggcaggacagctacggcaatgaagtggacgaacagaccctcaaggatttt
gccgtgctgttgcaagacgtacagatggagggcgagcagccatga
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