Pseudomonas hefeiensis: PSH57_22770
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Entry
PSH57_22770 CDS
T09985
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
phef
Pseudomonas hefeiensis
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phef03009
]
PSH57_22770 (rimO)
Enzymes [BR:
phef01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PSH57_22770 (rimO)
Ribosome biogenesis [BR:
phef03009
]
Prokaryotic type
ribosomal protein modification factors
PSH57_22770 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
WLH11645
LinkDB
All DBs
Position
5069572..5070912
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AA seq
446 aa
AA seq
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MSTTTAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLAVTGPQQYEQVVNAVHDVVP
PRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKAGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWRQICPD
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLDLDVVPDEVK
QDRWERFMAHQQAISSARLQMRIGRKIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGS
NLKPGDKVWCKVTDADEYDLWAEQIG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactaccgcgccggccaaccccaaggttggcttcgtatccctgggttgcccg
aaggctctggtcgactccgagcgcatcctgacccagctgcgcatggaaggttatgacgtc
gtatccacgtaccaggacgccgacgtggtagtggtcaacacctgcggcttcatcgactcg
gccaaagccgaatccctggaagtgattggcgaagccatcaaggaaaatggcaaggtcatc
gtcactggctgcatgggtgtggaagaaggcaacatccgcaacgtgcaccccagcgtgctg
gccgtgaccggtccgcagcaatacgagcaggtggtcaatgccgtgcacgacgtcgtgccg
ccccgccaggaccacaacccgctgatcgacctggtaccgccgcaaggcatcaagctgacc
ccgcgccactacgcttacctgaagatttccgaaggctgcaaccacagctgcagcttctgc
atcatcccctcgatgcgcggcaaactggtgagccgcccggtgggtgatgtgctcgacgag
gcccaacgtctggtcaaggccggcgtcaaggagctgctggtgatctcccaggacaccagc
gcctatggcgtcgacgtgaaataccgcactggcttctggaacggcgcgccggtgaaaacc
cgcatgaccgaactgtgcgaagccctcagcaccctcggcgtgtgggtccgtctgcattac
gtttacccatatccgcatgtcgacgaactgatcccgctgatggccgccggcaagatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaagtcctcaaggccatgaagcgc
ccggctttcgaagacaagaccctggcccgcatcaagaactggcgccagatctgcccggac
ctgatcatccgctcgaccttcatcgtcggcttccctggcgaaaccgaggaagacttccag
tacctgctggattggctgaccgaagcccagctcgaccgcgtcggctgcttccagtattcg
cccgtcgaaggcgcaccggccaacgacctggacctggacgtggtgccggacgaggtcaaa
caggaccgttgggagcgtttcatggcgcaccagcaggccatcagctcggcgcgcctgcaa
atgcgcatcggccgtaaaatcgaagtgctggtggatgaagtggatgaacaaggcgccgtg
ggccgctgcttcttcgacgccccggaaatcgatggcaacgtattcatcgacaacggcagc
aacctcaagccgggcgacaaggtctggtgcaaggtaaccgacgccgacgaatacgatctg
tgggctgagcagatcggttga
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