Pseudomonas hefeiensis: PSH57_23400
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Entry
PSH57_23400 CDS
T09985
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
phef
Pseudomonas hefeiensis
Pathway
phef03410
Base excision repair
phef03430
Mismatch repair
phef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSH57_23400 (recJ)
03430 Mismatch repair
PSH57_23400 (recJ)
03440 Homologous recombination
PSH57_23400 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phef03400
]
PSH57_23400 (recJ)
DNA repair and recombination proteins [BR:
phef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PSH57_23400 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSH57_23400 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PSH57_23400 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WLH11766
UniProt:
A0ABY9G800
LinkDB
All DBs
Position
complement(5199634..5201343)
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AA seq
569 aa
AA seq
DB search
MRIEPRQLPDTLPFLGDLPPLLTRLYAARGVQSEAELDKSLARLIPYQQLKGIDAAVDLL
VVALEQRQRILIVGDFDADGATASTVGMLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV
ALTREPQLLITVDNGISSVEGVAAAKAAGLKVLVTDHHLPGLELPAADAIVNPNQPGCEF
PSKALAGVGVIFYVLMALRARLRSLGRYASSPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGIKAILEVARRDHSRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLTDDPALAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPVESMPFGLCLFDPQWHQG
VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVPGFHIRDALSVVAAQHPTLISKYGG
HAMAAGLTLAQENFPLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA
GPWGQHFPEPMFHGVFQLVEQRVVGERHLKVVLKSECGSVKLDGIAFGVDRDIWPNPTVR
WVELAYKLDLNEFRGQETVQLMIAHIEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatagaacctcgccagctacccgacaccctgccattcctcggtgacctgccgccc
ctgctgacgcgcctgtatgcggcccgtggcgtgcagtccgaggcagaactggacaagagc
ctggcgcgcttgattccttatcagcaactcaagggcatcgacgcggcggtggatctgttg
gtggtggcgctggagcagcgccagcgcatcctgatcgttggcgactttgatgccgatggc
gcgacggccagcacggtgggcatgttggggctgcgcttgctcggtgcggcccatgtcgac
tatctggtgcccaatcgcttcgagtacggctacggactgaccccggaaattgtcgaggtc
gccctgacccgtgagccgcagttgctgatcaccgtggacaacggtatttccagcgtcgaa
ggtgtggcggcggcaaaagcggcggggctcaaggtactggttaccgaccaccatttaccg
ggccttgaactgccggcggccgacgctatcgtcaacccgaaccagccgggctgtgaattc
ccgagcaaggcattggccggtgtcggcgtgattttttatgtgttgatggcgttgcgggcg
cgtctgcgcagcctgggccgttacgccagcagcccccagccaaacatcggcgaactgctg
gacctggtggcactgggcagcgtggcggatgtggtgcccctggacgccaacaaccggatc
ctggtgcaccagggcctggaacgcattcgtgcagggcgcgcccgccccggcatcaaggcc
atcctggaagtggccaggcgcgatcattcccgtatcacctccacggacctcgggtttatc
ctcggcccgcgtctgaacgccgccgggcgtctggacgacatgagcctgggcatcgaatgc
ctgctcactgacgatccggccttggcgcgggagatggcggcgcaactggacggcatgaac
caggatcgcaaatccatcgaacagggcatgcagcgtgaagcgctggcccagctcaaggac
ttgccggtggaatcgatgccgttcgggttatgcctgttcgatccacagtggcaccagggc
gtcatcggtatcctcgcctcgcggatgaaagagcgctattttcgtccgaccattgctttt
gccgatgccggtgacggcctgctcaagggctcggggcgctcggtgccggggtttcatatt
cgcgatgccctaagtgtagtggcggcgcaacatccaaccctgatcagcaagtatggcggc
cacgccatggcggcggggctgacgttggcgcaagagaattttccattgttcgccgaggcg
ttcgacgctgaagtgcgccggcaattgcgtgaagaagacctgaccgggcgcctgttgtcg
gacggcaccctggcggtggaggagtttcacctggagctggcccgggcgctgcgtcacgcc
gggccctggggccagcatttcccggagccgatgtttcacggcgtgttccagttggtcgaa
cagcgcgtggtgggcgaacggcacctcaaggtcgtcctcaagagcgaatgcggttcggtg
aagcttgacggcattgcctttggcgtcgatcgcgatatttggccaaaccccaccgtgcgc
tgggtcgaactggcctacaaacttgacctcaacgagtttcgcggccaggaaacggtgcag
ttgatgattgcccatatcgaaccgcgctag
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