Pseudomonas hefeiensis: PSH57_25030
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Entry
PSH57_25030 CDS
T09985
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
phef
Pseudomonas hefeiensis
Pathway
phef03030
DNA replication
phef03430
Mismatch repair
phef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSH57_25030
03430 Mismatch repair
PSH57_25030
03440 Homologous recombination
PSH57_25030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phef03032
]
PSH57_25030
03400 DNA repair and recombination proteins [BR:
phef03400
]
PSH57_25030
Enzymes [BR:
phef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSH57_25030
DNA replication proteins [BR:
phef03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSH57_25030
DNA repair and recombination proteins [BR:
phef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSH57_25030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WLH12055
UniProt:
A0ABY9G958
LinkDB
All DBs
Position
complement(5547825..5548436)
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGITPSSSCRATEIAVVILEQGRIVDRYQSLMNAGVRVPAFIEQLTGIS
NAMLRSAPPAEKVMNEVNEFVGITPLLAHNAAFDQKFWDFELGRIKRTRLQNFACSLLLA
RRLMPSAPNHKLGTLNTFAGLPHTGQAHRAMADAEMAANLTAHLATQLRQQHGLRELSHD
LLCSLQKVPAAKINEHLKRHRGF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgcatcgcagtcatcgactttgaaaccaccggcatcacgccgagcagcagttgc
cgggccaccgaaatcgccgtggtgattctcgaacagggccggattgtggatcgctatcaa
agcctgatgaacgccggtgtgcgcgtgcctgcgttcatcgagcaactgaccggcatcagc
aacgccatgctgcgcagcgccccgcctgcggaaaaggtgatgaacgaggtcaacgagttc
gtcggcatcacaccgctgctggcccacaacgccgcgttcgaccagaagttctgggacttc
gaactgggccggatcaagcgcacccgtttgcagaattttgcctgttcactgctgctggcc
cggcgcctgatgccgtcggcgccgaaccacaagctcggcacactcaacaccttcgccggc
ctgccccacaccggccaggctcaccgggccatggccgacgccgaaatggccgccaacctc
accgcgcaccttgcgacgcagctgcggcaacagcacgggctgcgggagttgtcccacgat
ttgctgtgcagtttgcagaaagtgccggcggcgaagatcaacgagcacctcaagcggcat
cgcggtttttaa
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