Pseudomonas hefeiensis: PSH57_25150
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Entry
PSH57_25150 CDS
T09985
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
phef
Pseudomonas hefeiensis
Pathway
phef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSH57_25150 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phef03400
]
PSH57_25150 (recD)
Enzymes [BR:
phef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSH57_25150 (recD)
DNA repair and recombination proteins [BR:
phef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSH57_25150 (recD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
AAA_11
UvrD_C_2
SH3_13
Helicase_RecD
AAA_22
Viral_helicase1
UvrD-helicase
AAA_17
AAA_16
AAA_28
SLFN-g3_helicase
PhoH
AAA_25
NTPase_1
AAA_5
T2SSE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WLH12077
LinkDB
All DBs
Position
complement(5571034..5573130)
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AA seq
698 aa
AA seq
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MNRSFADLLPKSSDDESLVDLAPLSRADDLLLLLTRWVERGWLRALDKAFVAFLHELAPE
DDPLVLLAAALTSHQLGHGHVCLDLFETLKEPDFALSLPPEGDSQAGVELLPSQILRTLD
GAHWCKVLATSALVALAVDEHEDARQRPLVLSGKRLYLRRYWAYERRIDEALCQRLAEHE
AAPGDLRERLNGLFGPATAAGPIDWQKLACALATRGAFSIITGGPGTGKTTTVVRLLALL
QAPAVEAGKPLRIRLAAPTGKAAARLTESISQQVRTLDVVDAVRERIPCDVTTVHRLLGS
RPGTRHFRHHGGNRLPLDVLVIDEASMIDLEMMANLLDALPTHARLVLLGDKDQLASVEA
GAVLGDLCRDAEEGWYSPRTLAWLETVSGENLTASDLQQDLNGTHALAQQVVMLRHSRRF
GEGSGIGQLARRVNQQQPEKARQLLVEGEFTDLFSLALKGEHDGALERLLLDGKAEGPKG
YRHYLSLLRQRRPAISRPLEDGCWTDWAREVLSAFDEFQLLCAVRKGPWGVAGLNQRITA
ALLKAQLIDSDHQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPERDGPDAGKQVLRVAFP
RNDGQGGVRFVLPSRLNDVETVFAMTVHKSQGSEFAHTALILPDALNPVLTKELVYTAIT
RGKQWFSLIEPRGGVFEEAVRRKVKRLSGLMLELEGTD
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgttcttttgccgatctgttacccaaatcctcagatgacgagagtcttgtggat
ctggctccgctgagccgtgcggatgacttgctgctgttgctcacgcgctgggtcgaacga
ggatggttgcgcgccctggacaaggcattcgtcgccttcctccatgaactcgcgcctgaa
gatgatccattggtgctgcttgctgcggcgctcaccagtcatcagttgggtcacgggcat
gtctgcctggatttgttcgaaacgctcaaggagccggatttcgccctgtcgctgccgcct
gaaggcgactcgcaagcgggtgtagagctgttgccctcgcaaatactacggaccctcgat
ggggctcactggtgcaaggtcctggcaaccagtgctttggtggctttagctgtcgatgag
catgaagacgcgcggcaacgccctttggtgttatcgggtaagcgtctttatctgcgtcgc
tattgggcctatgaacggcggatcgatgaggcattgtgtcaacgccttgccgaacatgaa
gcggcgcctggtgatcttcgcgagcgtttgaacgggttgttcgggccggccacagccgct
ggtccgatcgattggcagaaactggcctgtgcgctggcgacccgaggagccttcagcatc
atcaccggcggcccgggtaccggcaagaccaccacggttgtgcgcttgctcgccctgctt
caggcgcctgctgtcgaggcgggcaagccgttgcggattcgcctggccgcgccgacaggc
aaggcggcggcgcgcctgaccgagtccatcagtcagcaggtccgcaccctcgatgtggtt
gacgccgtgcgcgagcgcattccctgcgatgtgaccacggtccatcgtttgttaggcagt
cggcctggtacccgacatttccgccaccatgggggcaatcgcttgccactggatgtgttg
gtgatcgatgaagcgtccatgatcgatctggaaatgatggccaatctgctggatgcgctg
ccgactcatgcgcgactggtgttgctgggtgataaggaccaactggcctctgttgaggcc
ggtgcggtgctgggggatttgtgtcgggatgccgaggagggttggtacagtccccggacc
ctggcctggctggagaccgtcagcggtgaaaacctgacggccagtgatctgcagcaagac
ctcaatggcactcatgccttggcccagcaagtggtcatgctcaggcattcgcggcgcttc
ggtgagggcagtgggattggtcaactggcgcgccgggtcaaccagcaacagccggaaaag
gcccgtcaactgctggtcgaaggcgaattcaccgacctgttttccctggcgctgaagggc
gaacacgatggggcgctggagcgcttgctactcgatggcaaggcagaagggccgaagggg
tatcggcattacctgagcctgttgcgtcagcgtcgcccggccatttcccgaccgcttgag
gacggctgctggaccgattgggcgcgggaggtcctgtcggctttcgacgagttccagttg
ctttgtgccgtacgcaaaggcccgtggggtgtcgcggggttgaaccagcgcatcaccgcc
gcgctgctcaaggcccagcttatcgacagcgatcaccaatggtacgaagggcgcccggtt
ctgatgacccgcaacgactacgggttgggcttgatgaacggcgatatcggtatcgcgctc
aagctgcccgagcgtgatggaccggatgcgggcaagcaggttctgcgggtggcgttccct
cgtaacgatggccagggcggcgtgcgtttcgtcctgcccagccgcttgaatgacgtggaa
accgtctttgccatgacggtgcataaatcccaaggttcggagttcgcccatacggctttg
attctgccggacgcgctgaacccggtgctgaccaaggaattggtgtacaccgccattact
cggggcaagcagtggttcagcttgatagaacccagagggggtgtctttgaggaggcggtc
cggcgcaaggtcaagcgcttgagcggattgatgctggagctggaaggaactgactga
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