Pseudomonas hefeiensis: PSH57_25155
Help
Entry
PSH57_25155 CDS
T09985
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
phef
Pseudomonas hefeiensis
Pathway
phef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSH57_25155 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phef03400
]
PSH57_25155 (recB)
Enzymes [BR:
phef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSH57_25155 (recB)
DNA repair and recombination proteins [BR:
phef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSH57_25155 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
AAA_25
AAA_30
AAA_11
AAA_16
AAA_12
Motif
Other DBs
NCBI-ProteinID:
WLH12078
LinkDB
All DBs
Position
complement(5573127..5576816)
Genome browser
AA seq
1229 aa
AA seq
DB search
MSHQPPLALSFPLRGSQLIEASAGTGKTFTISALYLRLVLGHGGPATGFGRELLPPQILV
VTFTDAATKELRERIRTRLAEAARFFRDEIAAPDSLIAELRDEFDAAQWSGCANRLDIAA
QWMDEAAVSTIHSWCQRMLREHAFDSGSLFTQTLETDHSDLLGEVLRDYWRLFCYSMQGE
ALNWVRTHWGGPAALLPRVRGLFSSECDAAEGLEPAELIAASLQERSAALLDLKAPWRQW
AVELLEICQQGVANKSVDGRKMQARYFEPWFQKINAWVEDESLELLDIGSGFTRLTPEGM
AEAWKGEVPSHPGLDAMSGLKASLEALPTPDAAVLQHAAQWVGARFEAEKRRRAEMGFDD
MLLRLDAALQAEGGERLASLIREQFPVALIDEFQDTDPIQYRIFESIYHIAESNPDTGLF
LIGDPKQAIYAFRGADIYTYLRAREATAGRLHTLGTNFRSSHAMVSAVNHIFQNAESRPK
GRGAFLFREPSGKNPVPFLPVESQGRKESLQIAGLPVAAMNIWHLPSDQPLSGAVYRQYM
AAACASEITALLNGGQSGCDGFAADEKTLQGLRPADIAILVRDGKEAQAVRDELSARGVR
SVYLSDKDSVFASQEARDLLTWLRACAEPDVERPLRAALASITLNLALTELEHLNQDELA
WERRVMQFRGYRTVWRTQGVLPMLRRLLHDFKLPQALMARSDGERVLTNLLHLCELLQQA
AGELDGEQALIRHLSEHLALSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYPLVFLPFI
CSTKPVDGSRLPLHYHDEACKAQISLTPTAELIAKADDERLAEDLRLLYVALTRAQHACW
LGVADLKRGNNNSSILHLSALGYLLGGGVPLVESVELRRWLEDLQQGSAVVNYQEMPQAT
NEHYRPPRNEAVLLEPLIPVRKASENWWIASYSALRIGESLSAGSNDAPENPQAQKLFDD
ERLDPDAPREIVAVGGDIHRFPRGPGPGTFLHGLLEWAAGEGFEAPPTAIEDAIARRCNR
RGWKGWIATLGDWLQHLIKLPMHIGGDQAPVVLENLSQFQVEMEFWFASHKVDVLKLDQL
VCQFTHGGVARVAAEPVLLNGMFKGFIDLTFEHEGRYYVADYKSNWLGVDDMAYTSQAME
QSILDNRYDLQYVLYLLALHRQLKARLPDYDYDRHVGGALYLFLRGTRSASQGVYFTKPP
RALIEQLDRMFQGTPEPKAQPAWEQGELL
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatcagcctccactcgcgctgtctttccctctacgtggcagccaattgatcgag
gccagtgccggtaccggcaagacctttaccatatcggcgttgtacctgcgtctggtactg
gggcacggcggcccggctaccgggtttggtcgcgagctacttcctccgcaaatcctggtg
gtgacctttacggacgctgccaccaaggagttgcgtgaacgtatccgcacgcgtctggcc
gaggcggcacgtttctttcgtgatgagattgcggccccggactcgctgatcgccgagttg
cgggatgaatttgatgccgcccagtggtctggctgtgcgaaccggttggacattgctgcg
caatggatggatgaagcggctgtctcgaccatccatagctggtgccagcgcatgctgcgt
gaacatgcttttgacagcggtagcctgtttacccagaccctggaaaccgatcacagcgac
ttgctcggcgaagtgctgcgcgactattggcggctattctgctactcgatgcaaggggaa
gcactgaactgggtgcggacacattggggcggacctgctgcgctgctgccgcgagtcaga
ggtctgttttccagcgagtgcgatgctgctgagggacttgaaccggccgaactgatcgcg
gcatcgctccaggagcgcagtgccgccttgctcgatctcaaggcgccgtggcggcaatgg
gccgtggagctgctggagatctgccagcaaggcgtcgccaacaaaagcgttgacgggcgc
aagatgcaggctcggtacttcgaaccgtggttccagaaaatcaatgcctgggtggaggac
gaaagccttgaactgttggacattggcagcggattcacacgcctgacgcccgagggcatg
gccgaggcctggaaaggcgaagtgcctagccatcccgggctggacgccatgtccggtctc
aaggccagcctggaagccctgcccacccccgatgccgcggtgctacaacatgccgcgcaa
tgggtgggggcacgctttgaagcggagaaacgtcgccgcgcggagatgggtttcgacgat
atgctgttacgtctggacgcagcccttcaagccgaaggtggagagcgtctggcaagcttg
atccgcgaacagtttccggtggcgctgatcgatgagttccaagacaccgacccgattcaa
tatcggatcttcgaaagcatctaccacattgcagaaagcaaccctgacaccgggctgttc
ctgatcggtgatccgaagcaggccatttacgcttttcgcggcgctgacatctatacctac
ctgcgcgcccgcgaagccaccgccggcaggctgcatacgttgggaacaaacttccgttcc
agccacgccatggtcagtgcggtaaaccatattttccagaacgccgaatcccgcccgaaa
gggcgcggtgcttttctgtttcgtgagccatcgggcaagaacccggtgccgttcctgccc
gttgagtcccaagggcgcaaggagtcgttgcagatcgccgggctacccgttgccgcaatg
aatatctggcacttgccttctgatcagccgctttccggggcggtgtatcggcagtacatg
gcggcggcttgtgccagtgagatcacggcgttgctcaatggcggccaatcggggtgcgat
ggctttgcggccgatgaaaagacgctccagggattgcgcccggcggatatcgccatcctg
gtgcgtgacggtaaagaagctcaggcagtacgcgacgaattgtctgcacggggagtgcgc
agtgtctatctgtccgataaagactcggtcttcgcctcccaggaggcgcgggacctgctg
acctggctcagggcctgcgccgagccggatgtcgagcgaccgctgcgggcagcgctggcc
agcatcacgttgaatcttgcgctgacggagcttgagcatctcaatcaggatgagctggcc
tgggagcgtcgggtcatgcagttccgtggctatcgtacggtctggcgtacccagggcgtg
ttgcccatgttgcgtcgcctgctacatgatttcaagctgccccaggccttgatggcgcgt
agcgacggcgagcgtgtgctgaccaatttgctgcacctttgcgagctgttgcaacaggct
gccggtgagctggatggcgagcaagctttgattcggcatctgtccgagcacctggcgctg
tccgggcaggctggcgaagaacagatcctgcgcctggaaagtgatgagcaactggtcaag
gtggtcacgattcacaagtccaaggggcttgagtatccgctggtcttcttgcccttcatc
tgttcgacgaaaccggtggatggcagtcgattgcctttgcattaccacgatgaggcctgc
aaggcgcagatcagcctcacgcctaccgccgagttgatagccaaggccgatgacgagcgt
ctggccgaggatctgcggcttctctacgtggccctgacccgcgcacaacatgcttgctgg
ctgggtgtggctgatctcaaacggggcaataacaacagctcgatcctgcacttgtccgca
ttgggctatctgttgggcggcggtgtgccgttagtcgagtcggtggaattgaggcgctgg
ctggaggacctgcaacaaggcagtgcagtggtcaactatcaggaaatgccccaggccacc
aacgagcattaccggccaccacgcaacgaagcggtactgcttgaacctttgataccggta
cgtaaagccagtgaaaactggtggatcgcctcctacagcgccttgcggattggggaaagc
ctgagtgcgggcagcaatgatgcgccggagaacccgcaggcccagaagctgttcgacgat
gagcggcttgaccccgatgccccaagggaaattgttgccgtgggtggtgatattcaccgc
ttccctcgcggtcccggtcccggcacattccttcatggtcttctggaatgggccgctggt
gaaggatttgaagctccgccaaccgccatcgaggatgccatagcccggcgctgcaaccgc
cgaggttggaaaggctggatcgctaccctgggtgactggctgcaacacttgatcaaactg
cctatgcacataggtggcgaccaggcgccggtggtgcttgagaacctgtcccagttccag
gtcgagatggagttctggtttgccagccataaggtcgatgtgctcaagctcgaccaactg
gtttgccaattcacccatggtggcgtcgctcgcgtggccgccgagccggtgctgctcaac
gggatgttcaaaggcttcatcgatttgacgttcgagcacgagggccggtattacgtggcc
gattacaagtccaactggctgggtgtcgatgacatggcctacacctcgcaggccatggaa
cagtcaatcctggacaatcgctacgacctgcaatacgtgttgtacctgttggccctgcac
cgtcagctcaaggcgcgcctgcccgactatgactacgatcggcatgtcgggggggcgttg
tatctgttcctgcgcggcacccgctcagccagtcagggcgtttatttcaccaagcctcca
cgggcgttgatcgaacaactggaccgtatgttccaagggacgcccgagcccaaggctcaa
ccggcatgggaacagggggagctgctatga
DBGET
integrated database retrieval system
