Pseudomonas hefeiensis: PSH57_25675 Help Entry PSH57_25675       CDS       T09985                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism phef  Pseudomonas hefeiensis Brite KEGG Orthology (KO) [BR:phef00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:phef03400]     PSH57_25675 Enzymes [BR:phef01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      PSH57_25675     5.6.2.6  RNA 3'-5' helicase      PSH57_25675 DNA repair and recombination proteins [BR:phef03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     PSH57_25675 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_4th_Lhr DEAD WHD_Lhr WHD_3rd_Lhr Helicase_C ResIII Cas3-like_C_2 MarR GntR HTH_Crp_2 HTH_IclR MarR_2 Fe_dep_repress HTH_24 HTH_5 Arg_decarbox_C Motif Other DBs NCBI-ProteinID:  WLH12171 UniProt:  A0ABY9G967 LinkDB All DBs Position 5686273..5690586 Genome browser AA seq 1437 aa AA seqDB search MNLPLPADHAMAGFHPAVRAWFSQTFPAVTAAQARAWPLIGQHRSTLVAAPTGSGKTLTA FLAVLDDLVHRGLEQGGLPDQTLVVYVSPLKALSNDIQINLQNPLAGITEQLRQMGLPPL HITTAVRTGDTPQKDRTAMRKTAPHILVTTPESLYVLLGSDSGRQMLASTRTVIVDEIHA IAASKRGSHLALSLERLQALCAEPLMRIGLSATQKPIEAVSRFLVGQGLSCEIVDIGHAR PRDLDIEVPPVPLSAVMANDVWELVYNRLADLAREHRTTLVFVNTRRLAERLSRHLSERL GKHAVAAHHGSLAKEFRLDAEQRLKRGELQVLIATASLELGIDIGDVDLVCQIASPRSIS AFLQRVGRSGHQVGGTPKGRLFATTRDDLIECAALLDCVRRGELDILHIPKAPLDVLAQQ IVAEVSCQEWQEQALLETFRRAAPYAELDDGHYQALLQMLAEGLNGRQGVRSAYLHRDAV TRTLRGRRGSKLTAVTSGGTIPDNADYSVLLEPQGLNIGSVNEDFAVESIAGDVFQLGNT SYRIIRVETGRVRVEDAQGQPPTIPFWLGEAPGRSAELSLAVARLQAQLDQLLGATPGNL QPALDWLTGTLQLNLASAEQLVDYLAPARLAFGALPSQDTLVMERFFDESGGTQLIIHSP FGSRINRAWGLALRKRFCRTFNFELQAAASEDAIVLSLSTSHSFELDEVWRYLNSHSAEQ ILIQAVLDAPLFGVRWRWNASVALALPRYSGGRKVAPQIQRMKSEDLIASVFPDQIACLE NLAGEREIPNHPLVEQTLDDCLHEAMDSEGWLTLLRRMEAGEIRLISRDLPAPSPLAAEI LSARPYTFLDDAPLEERRTQAVINRRWSDPQSTDDLGALDAEAIHAVRDEAWPAPTNLDE MHEALMSLACIADSEASTQGPWLDWLQALAERGRASHVQISAERGLWVALERLTCLQAIY PQAQWRPPLTPLAGFDEPWDRDEAVVEVLRARLSAFGPLPLKAIAYPLGLSTPTITQALA QLEQQGYVLRGRFTPGSGQEEWCERHLLARIHRYTVKRLRREIEPVMLQDFMRFLFDWQH LSPSTQGRGSAVLPSIISQFEGYPAAASAWDSDLLPARIKDYSPSWLDELCRSGKLVWTR LSARQTFSSSALRSTPVVLLPRNQVALWRSLTEQPPPSELSPKTQKVHKALSEHGALFFD ELLHEAHLLRSELEIALQELVGAGLVNADSFAGLRALITPASKRQARSSRRGRGAFVGGM DDAGRWALLRRSAPMPEEGNRPAPLSPDTLEHIAMTLLRRYGVVFWRLLEREADWLPSWR ELLRTFHRLEARGEIRGGRFVSGLAGEQFALPEAIPLLREVRRRPSDGALVAVCGVDPLN LAGTLLPGAKVPALASNRLVYRDGLPAAAQIAGKQHVWLELDAQGMAEVRNKLIQRS NT seq 4314 nt NT seq  +upstreamnt  +downstreamnt atgaatctgcccctcccagccgaccacgccatggcaggctttcatcccgccgttcgcgcc tggttcagccagacattcccggcggtcacggccgcccaggcccgggcgtggccgttgatc gggcagcaccgttcgaccctggtggccgcacccacgggatcgggcaagaccctgacggcg tttcttgccgttctggatgacctggtacaccggggcctggaacagggcggcctgccggac cagaccctggtggtttacgtctcgccgctcaaggcactgagcaacgatatccagatcaac ctgcaaaacccactggccggcatcaccgaacagttgcgacaaatgggcttgccgcccttg cacatcaccaccgccgtgcgcaccggcgacacgccacaaaaagaccgtacggcgatgcgc aagaccgcgccgcatattctggtgaccacccccgaatcgctttacgtgctactgggctcc gattccggccggcagatgctcgccagcacccgcaccgtgattgtcgacgaaatccacgcc atcgccgccagcaaacgcggcagtcacctggccttgagcctggagcgtctgcaagcgctt tgcgccgaaccgctgatgcgcatcggactgtccgccacgcaaaaacccatcgaagcggtg tcgcgctttctcgttggccaggggctcagctgtgaaatcgtcgacatcggccacgcccgc ccgcgggacctggacatagaagtgccaccggtgccgctctcggcggtgatggccaatgat gtgtgggagctggtctacaaccgcctcgccgacctggcccgggaacaccgcaccacgctg gtgttcgtcaacacccggcggctggccgagcgcctgagccgtcatttgagcgaacgcctg ggcaagcacgccgtggccgcccaccacggcagcctcgccaaggagtttcgcctcgacgcc gaacaacggctcaagcgcggcgagttgcaggtgttgatcgccaccgcgtccctggaactg ggcatcgatatcggcgatgtcgacctggtgtgtcagatcgcctcgccgcggtcgatctcg gcgtttttgcaacgggtcggccgctcgggccatcaggttggcggcacgcccaagggccgc ctgttcgccaccacccgcgacgacttgatcgaatgcgccgccctgctcgactgcgtacgc cgtggcgagctggacattctgcacatccccaaggcgccgctggatgtactggcccagcag atcgtcgccgaggtcagttgccaggaatggcaggagcaggcgctgctggaaacctttcgc cgtgccgcgccctatgccgagctggacgacggccactatcaggcgctgctgcaaatgctc gccgagggcctcaatggtcgtcagggcgtgcgcagtgcgtacctgcatcgcgacgccgtc acccgcaccctgcgcgggcgccggggcagcaagctgaccgccgtgaccagcggcggcacc atcccggacaacgccgactacagcgtgctgctcgaaccccaggggttgaacatcggcagc gtcaacgaagacttcgccgtggagagcattgccggtgacgtgttccagctgggcaatacc tcctaccgcatcattcgcgtcgagaccggtcgggtccgagtcgaggacgcccagggccag ccgccgaccattccgttctggcttggcgaagcccccgggcgcagcgccgagctgtccctg gcggtcgctcgtctgcaggcccaactggaccaactgctcggtgccacaccgggcaacttg caaccggccctcgactggctgaccggcaccttgcaactgaacctggccagtgccgaacaa ttggtggattacctggccccggcacgcctggccttcggcgccctgccgtcccaggacaca ctggtgatggagcgttttttcgacgagtccggcggcacgcaactgatcatccattcccca ttcggcagccgcatcaaccgcgcctggggcctggccctgcgcaagcggttctgccgcacc ttcaatttcgaattgcaggccgccgccagcgaagacgccatcgtgctgtcgctgtccacc agccacagcttcgagctggacgaggtctggcgctatctcaacagccatagtgccgaacag atattgatccaggccgtgctggatgcgccgctgttcggcgtgcgctggcgctggaatgcc agtgtcgccctggccttgccacgctattcgggcgggcgcaaagtcgccccacagatccag cgtatgaaaagcgaagacctgatcgccagcgtattcccggaccagatcgcctgcctggag aacctcgccggcgaacgggaaatccccaatcacccactggtggaacagaccctcgacgac tgcctgcacgaagccatggacagcgaaggctggctgacgctattgcggcgcatggaagcc ggcgagattcgtctgatcagccgcgacttaccggcgccctcgccgctggcggcggaaatc ctcagcgcgcggccctacacctttctcgacgacgccccgctggaagaacgccgcacccaa gcggtgatcaaccggcgctggagcgacccacagtccaccgatgacctcggcgccctcgac gccgaagccatccacgcggtccgggacgaagcctggccggcccccaccaacctcgatgaa atgcacgaagcactgatgagcctggcctgcatcgccgacagcgaggcaagtacccaaggg ccgtggctggactggctgcaggccctggccgagcgcggccgcgccagtcatgtgcagatc agcgccgaacgaggtctgtgggtggcactggaacggctgacctgcctgcaagccatttat ccacaggctcaatggcgaccgccgctgacgccgctggcgggttttgatgaaccttgggac cgcgacgaagccgtggtggaggtactgcgcgcacggctcagcgccttcggtccgctgccg ttgaaggccatcgcctatccgctggggctatcgaccccgacaatcacccaggccctggcg caactggaacagcaaggctatgtgctgcgtggccgattcacccccggcagcgggcaggaa gaatggtgcgagcggcatttgctggcgcgtatccaccgctacacggtcaagcgcctgcgc cgggaaatcgaaccggtgatgttgcaggatttcatgcggttcctgttcgactggcagcat ctgtcgccgtccactcagggccggggtagcgcggtgctgccgtcaatcatcagtcagttc gaaggctacccggccgcggcttcggcgtgggacagcgacctgttgccggcgcgaatcaaa gactattccccgagctggctcgatgagctgtgccgcagtggcaagctggtgtggactcgc ctgagtgctcgccagacgttctcttccagcgccttgcgcagcacgccggtggtgttgctg ccgcgcaatcaggtcgccctttggcgcagcctgaccgaacagcccccacccagcgaactg tcgcccaagacgcaaaaagtccataaggccctcagcgaacacggcgcgctgttttttgat gagttgttgcacgaggcgcacttgctgcgcagcgaactggaaatcgcgctacaggaactg gtaggcgccgggctggtgaatgccgacagcttcgccgggttgcgcgcgttgatcacccct gccagtaaacgccaggcgcgcagcagtcggcgcgggcgcggggcattcgttggcggcatg gacgatgccgggcgctgggccttgttacgccgcagcgccccaatgcccgaggaaggaaac cggccagcgcccctatcgcccgacaccctggagcacattgcgatgaccttgctgcgccgt tatggcgtggtgttctggcgcctgctggagcgggaggcggattggttgccgagctggcgc gagttactgcgcacttttcatcgcctggaggcgcggggagagattcgcggcggacgtttt gtcagcggcctggcgggcgagcaattcgccctgcccgaagccattccattgctacgggaa gtgcgccgccgccccagcgatggcgccctggtcgcggtgtgcggcgtcgacccgctgaac ctggccggcaccttgttgccgggagcgaaagtgccggcactggcgagcaatcggctggtg tatcgcgatggcctgccggcggcggcgcagatcgctggcaaacagcatgtgtggctggag ctggatgcgcagggcatggctgaggtgaggaacaagctgatccagagaagttga

DBGET integrated database retrieval system