Pseudomonas hefeiensis: PSH57_25715
Help
Entry
PSH57_25715 CDS
T09985
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
phef
Pseudomonas hefeiensis
Pathway
phef02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSH57_25715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phef03021
]
PSH57_25715
Transcription machinery [BR:
phef03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSH57_25715
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
PhyR_sigma-like
Sigma70_ECF
HTH_31
HTH_40
HTH_7
YuA_Gp49
Motif
Other DBs
NCBI-ProteinID:
WLH12179
UniProt:
A0ABY9G993
LinkDB
All DBs
Position
5698173..5698682
Genome browser
AA seq
169 aa
AA seq
DB search
MSAASSGNAQLHQLYRDHHGWLHAWLRRKLGNHDHAADIAQDTFLRLLVSGRIPGVVEGR
SYLTQIARNLVIDQWRRQRIERAYLESIAHLPEPQTPCLETRAIILETLQKIDAMLDRMP
SNVRTAFLLSQFEGLGYAQIAERLQVTVSSVQKYMTRAILACYQTVYEE
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagcttccagtggcaatgctcaactgcatcaactctaccgcgatcaccacggg
tggctgcacgcctggttgcgtcgaaagctgggcaaccatgaccacgcggcggacatcgcg
caagatacatttctgcgtctgctggtttccgggcgtatccccggggtagtggaagggcgc
agttacctgacccagatcgcccgtaaccttgtgattgatcagtggcgtcggcagcgaatc
gaacgggcctatctggaaagtatcgcccatttgcccgagccccagacgccttgcctggag
acgcgagcaatcatcctggaaacgcttcagaagatcgacgcgatgctcgaccggatgccc
agcaacgtgcgaaccgccttcctgctgtcgcaattcgagggccttggctatgcgcaaatt
gccgaacgtctgcaagtcacggtcagctcagtacaaaaatacatgacccgcgccatcctg
gcctgctaccagacggtctatgaagaatga
DBGET
integrated database retrieval system
