Pseudomonas hefeiensis: PSH57_26485
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Entry
PSH57_26485 CDS
T09985
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
phef
Pseudomonas hefeiensis
Pathway
phef02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSH57_26485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phef03021
]
PSH57_26485
Transcription machinery [BR:
phef03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSH57_26485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
Sigma70_ECF
HTH_24
Sigma70_r3
HTH_17
MerR
HTH_29
FaeA
Motif
Other DBs
NCBI-ProteinID:
WLH12314
UniProt:
A0ABY9G9M9
LinkDB
All DBs
Position
5856930..5857448
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AA seq
172 aa
AA seq
DB search
MSSVPSPHSDLVGALYRDHRRWLLAWLRRNVACPQRAEDLSQDTFVRLLGREDLTAPREP
RAFLVAIAKGLLFDYFRRAALEQAYLTELMLIPENEQPSVEEQQLILEDLKAIDRLLGKL
SSKARAAFLYNRLDGLGHAEIAERLGVSVPRVRQYLAQGMRQCYIALYGEPT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtcagtcccaagcccccacagtgatctggttggtgcgttgtaccgtgaccatcgc
aggtggctattggcatggctgcgccgcaacgtggcctgcccacagcgggccgaagatctg
agccaggataccttcgtgcgcctgctgggccgggaggatctgacagcgccccgggagccc
agggcgtttctggtggcgatcgccaaggggttgctgttcgattatttccgtcgggcggcg
ctggagcaggcttacctcaccgagctgatgctgatcccggaaaacgaacagccgtcggtg
gaagagcagcaactgatcctcgaagacctcaaggctattgaccggctgctcggaaaattg
tcgagcaaggcccgtgccgccttcctttataaccgcctcgacggcctcggccatgcagaa
atcgccgagcgcctgggggtttccgtgccacgggtgcggcagtacctggcccagggcatg
cgccagtgctacatcgcactttatggtgagccaacatga
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