KEGG   Pseudomonas hefeiensis: PSH57_26485
Entry
PSH57_26485       CDS       T09985                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
phef  Pseudomonas hefeiensis
Pathway
phef02020  Two-component system
Brite
KEGG Orthology (KO) [BR:phef00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PSH57_26485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phef03021]
    PSH57_26485
Transcription machinery [BR:phef03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PSH57_26485
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Rv2175c_wHTH Sigma70_ECF HTH_24 Sigma70_r3 HTH_17 MerR HTH_29 FaeA
Other DBs
NCBI-ProteinID: WLH12314
UniProt: A0ABY9G9M9
LinkDB
Position
5856930..5857448
AA seq 172 aa
MSSVPSPHSDLVGALYRDHRRWLLAWLRRNVACPQRAEDLSQDTFVRLLGREDLTAPREP
RAFLVAIAKGLLFDYFRRAALEQAYLTELMLIPENEQPSVEEQQLILEDLKAIDRLLGKL
SSKARAAFLYNRLDGLGHAEIAERLGVSVPRVRQYLAQGMRQCYIALYGEPT
NT seq 519 nt   +upstreamnt  +downstreamnt
gtgtcgtcagtcccaagcccccacagtgatctggttggtgcgttgtaccgtgaccatcgc
aggtggctattggcatggctgcgccgcaacgtggcctgcccacagcgggccgaagatctg
agccaggataccttcgtgcgcctgctgggccgggaggatctgacagcgccccgggagccc
agggcgtttctggtggcgatcgccaaggggttgctgttcgattatttccgtcgggcggcg
ctggagcaggcttacctcaccgagctgatgctgatcccggaaaacgaacagccgtcggtg
gaagagcagcaactgatcctcgaagacctcaaggctattgaccggctgctcggaaaattg
tcgagcaaggcccgtgccgccttcctttataaccgcctcgacggcctcggccatgcagaa
atcgccgagcgcctgggggtttccgtgccacgggtgcggcagtacctggcccagggcatg
cgccagtgctacatcgcactttatggtgagccaacatga

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