Pseudomonas hefeiensis: PSH57_26760
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Entry
PSH57_26760 CDS
T09985
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
phef
Pseudomonas hefeiensis
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phef03009
]
PSH57_26760 (dbpA)
Enzymes [BR:
phef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PSH57_26760 (dbpA)
Ribosome biogenesis [BR:
phef03009
]
Prokaryotic type
rRNA helicases
PSH57_26760 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
PRAI
Motif
Other DBs
NCBI-ProteinID:
WLH15572
LinkDB
All DBs
Position
5925183..5926520
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AA seq
445 aa
AA seq
DB search
MLANLESLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGIGLLNPINPRFFGCQ
ALVICPTRELADQVAKEIRRLARAEDNIKVLTLCGGVSFGPQIASLEHGAHIIVGTPGRI
QQHLRKSSLVLDGLNTLILDEADRMLDMGFYDAIEDIIQQTPERRQTLLFSATYPVGIKQ
LSSKFMRNPQQVKAEAFHSDAQIEQRFYEISPEERMDAVVKVLAHFRPASCVAFCFTKQQ
VQETVDHLTSKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVATDVAARGLDIDALDMV
INVELARDSEIHIHRVGRTGRAGEKGIAISLVAPSEAHRAQAIEQLQKSPLSWDQLDNLK
PQGGGPLLPAMSTLCIGAGRKDKVRPGDILGALTGDAGIPGAQVGKIAIFDFQAYVAVER
AIAKQALQRLNDGKIKGRSLRVRIL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgctggctaacctcgaatccctcggttacgcccagatgacgccgatccaggcgcagagc
ttgccggtgatcctcaagggcatggacctgatcgcccaggccaagaccggcagcggcaag
accgcggccttcggcatcggcctgctgaacccaatcaacccgcgcttcttcggctgccag
gcactggtgatctgcccgactcgcgagctggccgatcaggttgccaaggaaatccgtcgc
ctggcccgcgccgaagacaacatcaaggtcctgaccctgtgtggcggcgtgtcgtttggt
ccacagatcgcgtccctcgagcatggcgcccacatcatcgtcggtacgcccgggcgcatc
caacagcacctgcgcaagagctcgctggtgctggatggcctcaacacgctgatcctcgat
gaagccgatcgcatgctcgacatgggcttctacgacgccatcgaagacatcatccagcag
accccggaacgccgtcagacgttgctgttctccgccacctacccggtgggtatcaagcaa
ctgtcgtccaaattcatgcgcaacccgcagcaggtcaaagccgaagcgtttcactccgac
gcgcagatcgagcagcgtttctacgaaatctcccccgaggaacgcatggacgctgtggtc
aaggtgctggcgcatttccgtccggcttcctgcgtggcgttctgcttcaccaaacagcag
gtccaggaaaccgtcgaccatctgacatccaaaggtatctcggcggtcggcctgcatggc
gacctggaacagcgcgaccgcgaccaggtgctggcgatgttcgccaaccgcagcacctcg
gtgctggtggccactgatgtagcggcccgaggcctggacatcgatgcgctggacatggtg
atcaacgtcgaactggcccgcgactcggaaattcacattcaccgcgtcggccgtaccgga
cgtgcgggtgaaaaaggcatcgccatcagcctggtggcgccgtccgaagcccaccgcgcc
caggcgatcgagcagttgcagaagtcgccactgagctgggaccaactggacaacctcaaa
ccccagggcggtggcccgctgctgccggccatgagcaccctgtgtattggtgccgggcgc
aaagacaaagtccgccccggcgacatcctcggcgccctgaccggcgacgccggcatcccc
ggtgcccaggtcggcaagatcgcgattttcgatttccaggcctacgtcgccgtggagcgc
gcaatcgccaagcaggcgctgcagcgcctgaacgatggcaagatcaagggccgctcgttg
cgggtgcggattctgtaa
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