Pseudomonas hefeiensis: PSH57_27945
Help
Entry
PSH57_27945 CDS
T09985
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
phef
Pseudomonas hefeiensis
Pathway
phef00300
Lysine biosynthesis
phef00470
D-Amino acid metabolism
phef01100
Metabolic pathways
phef01110
Biosynthesis of secondary metabolites
phef01120
Microbial metabolism in diverse environments
phef01230
Biosynthesis of amino acids
Module
phef_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSH57_27945 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSH57_27945 (dapF)
Enzymes [BR:
phef01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PSH57_27945 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
SPO11_like
Tail_completion_gp17
Motif
Other DBs
NCBI-ProteinID:
WLH12583
UniProt:
A0ABY9GBF7
LinkDB
All DBs
Position
6169944..6170774
Genome browser
AA seq
276 aa
AA seq
DB search
MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPNNPDVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGIIELDVRSDGQIGVNM
GAPRLIPADIPFEAPAQALSYQLEVDDTTVDLAAVSMGNPHAVLRVSDINNAPVHELGPK
IENHPRFPARVNVGFLQVIDRHRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVLMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacggcctgggcaatgacttcatggtcctcgacctg
gtcagccagcacgcgcacatcctgcccaagcatgccaaacaatggggcgaccggcacacc
ggtatcggtttcgaccaattgctgatcgtcgaagcgcccaataacccggacgtggacttc
cgttaccggatcttcaacgccgatggttcggaagtcgagcagtgcggcaacggcgcgcgc
tgcttcgcccgctttgtgctggacaagcgcctgaccgccaaacggcagattcgcgtcgag
actaaaagcggcatcatcgaactggatgtacgcagcgacggccagatcggcgtcaacatg
ggtgccccgcgcttgataccggcggacattccgttcgaagcgccggcccaggccttgagc
tatcagttggaggtcgacgacaccacagtggacttggcggccgtgtccatgggcaacccc
catgccgtcttgcgagtcagcgatatcaacaacgcgccggtgcatgagctgggaccgaag
atcgaaaatcatccgcgcttccccgcgcgggtgaatgtcggtttcctgcaggtcatcgac
cgtcaccgtgcgcaattgcgtgtctgggagcgcggtgccggggaaacccaggcgtgcggc
accggcgcctgcgcggcggcagtcgccgcgatcagccaggggtggatggattcgcctttg
ctgatcgacctgcccggcggacgcctgtccatcgaatgggcaggccccggtcaaccggtg
ctgatgaccggaccggcagtacgtgtatacgaaggacaagttcgtctttga
DBGET
integrated database retrieval system