Providencia heimbachae: NCTC12003_00040
Help
Entry
NCTC12003_00040 CDS
T05509
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
phei
Providencia heimbachae
Pathway
phei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12003_00040 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phei03019
]
NCTC12003_00040 (recQ_1)
03400 DNA repair and recombination proteins [BR:
phei03400
]
NCTC12003_00040 (recQ_1)
Enzymes [BR:
phei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC12003_00040 (recQ_1)
Messenger RNA biogenesis [BR:
phei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC12003_00040 (recQ_1)
DNA repair and recombination proteins [BR:
phei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC12003_00040 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
RecQ_Zn_bind
ETF
Motif
Other DBs
NCBI-ProteinID:
SQH11385
LinkDB
All DBs
Position
1:complement(54156..56270)
Genome browser
AA seq
704 aa
AA seq
DB search
MNRDQAKLHLQTALANTDADFRDGQWEAIDALVNHRQKLLVVQRTGWGKSSVYFISTKIF
RDRGMGPTIIVSPLLALMRNQIESAARLGIVAETMNSTNTADWQAVTQRILNNQIDCLLI
SPERLANDNFIETVLQPIADRIALMVIDEAHCISDWGHDFRPDYRRIVNILRQLPANTPV
LGTTATANNRVVADIQEQIGDIQIHRGPLTRESLTLQTMLLPDQASRLAWLAQVIPTLLG
TGIVYTLTVRDAEQVANWLTNNGIDAKAYHGSVEAEGFENSNTYRQHLEELLLNNRLKVL
VATSALGMGYDKPDLSFVIHYQAPGSIVGYYQQVGRAGRGIDHAVGVLMSGVEDQDIHEF
FRESAFPSEAQVNEILHVLEQSDGLSLRSIEEQTNLRHGQIEKVLKLLSVENPAPVIKDG
SRWFRTPVRYQMDHARIAHLTGQRVQEWQEVQAYLADTDCKMAFLRRALDDLNPTPCGKC
ASCIGTPIIHQNIDPTLAHSAGTFLRHAEMVIQPRKQIAPSNAETIRAFPTYQFPRLLGA
LASQPGRVLSRWGDAGWGHTVADDKHNGKFSDELVGAMAEMILERWQSNPPPEWVCCVPS
RNHPELVPDFALRLAARLGLPFVDAVSKVQNNQQQKGQQNSFHQCRNLDGVFAVNRDIPT
TPVLLVDDIVDSGWTLTVISALLQQAGSGVVYPVALASSSVKDS
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaatagagatcaagctaagctccacctgcaaactgctttggcaaatactgacgccgat
ttccgtgatggccaatgggaagcgattgatgctctggtcaatcatcgacagaaattgtta
gtggtgcagcgtacaggttggggtaaaagctcggtttactttatcagcacaaaaattttt
cgtgatcgcggtatggggccgaccattatcgtgtcgcctttgctggcgttgatgcgcaat
caaattgaatctgctgcgcgtttaggtatcgttgctgaaaccatgaactccactaatacc
gctgattggcaggcggttactcaacggattcttaataatcaaatcgattgtttgctgatt
tctcctgagcggctggccaacgataacttcattgaaaccgtcttacagcctattgccgac
cgtatcgccctgatggtgattgatgaggcgcactgtatttctgattggggccacgacttc
cgccccgactatcgccgtatagtaaatatcctgcgccagctacccgctaacacaccggtt
ttaggcaccactgcaaccgcgaacaatcgcgtcgtcgctgatattcaagagcagattggt
gacattcaaatccaccgtggcccactgactcgcgaaagccttactctgcaaaccatgcta
ttgcctgatcaagcatctcgcttggcttggttggctcaagtcattccgacattactgggt
acggggatcgtttatactttaacggtgcgcgatgctgagcaagtcgccaactggctcact
aataatggtattgatgctaaggcttatcatggcagcgttgaggcagaaggctttgaaaat
agcaatacgtatcgccaacacttggaagagttgttactcaacaatcggttaaaggtgtta
gtcgcaacctcggctttgggcatgggctatgacaagccggatttaagttttgttatccac
taccaagcgccgggctctatcgttggttattatcagcaggtaggtcgagctgggcgaggc
attgaccatgcagttggcgtattgatgtcaggtgtggaagatcaggatattcatgaattt
ttccgcgagtcggcgttcccatctgaggcgcaggtgaatgaaattttacacgtactggaa
caaagcgatggtttgtcattgcgcagtattgaagagcaaaccaacctgcgtcatggtcaa
attgaaaaagttcttaaattattgagtgtggaaaatccggctcctgtaatcaaagacggc
agccgttggttcagaacccctgttcgctatcaaatggatcatgcccgaatcgctcattta
acaggccagcgtgttcaggaatggcaagaagttcaggcataccttgcagatactgattgt
aagatggcctttcttcgtcgagcgcttgacgatcttaatccaacgccctgcggtaagtgc
gcatcttgtatcggaaccccgataattcaccagaatattgatccaactttggcgcatagt
gcaggaaccttccttaggcacgcagaaatggtcattcagcctagaaagcaaatcgcgcct
tctaatgcagagaccattcgtgctttccccacttatcaatttccacgtttactcggtgca
ttggcgtcacaacctgggcgagtactttcgagatggggtgatgcaggatggggacacacg
gttgcagatgataaacacaacggtaaattttcagacgaacttgttggagctatggctgaa
atgattctagaacgctggcagtccaatcctccgccagagtgggtatgttgtgtgccttcg
cgcaaccacccagaactggtgccagattttgctctcaggctagcggctcgtttaggtttg
ccttttgttgatgctgtcagtaaggtgcaaaataatcaacagcagaagggccagcaaaat
agcttccatcaatgtcgtaatttggatggggtatttgctgttaatcgagatattccaact
actccagtgttacttgttgatgacatagtagattctggttggacgctgaccgttatatca
gcattattacaacaagcaggtagcggtgtcgtgtatcccgtggcacttgcttcctcttcg
gtgaaagactcatga
DBGET
integrated database retrieval system
