Providencia heimbachae: NCTC12003_00712
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Entry
NCTC12003_00712 CDS
T05509
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
phei
Providencia heimbachae
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phei03400
]
NCTC12003_00712 (sbcC)
DNA repair and recombination proteins [BR:
phei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC12003_00712 (sbcC)
Archaeal homologous recombinant proteins
NCTC12003_00712 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
SMC_N
AAA_22
cobW
Motif
Other DBs
NCBI-ProteinID:
SQH12035
LinkDB
All DBs
Position
1:complement(814526..818209)
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNINSLKGEWKIDFTQEPFASQGLFAITGATGAGKTTLLDAICLALYHQTPR
LGPISASQNELMTRHTGECLAEVEFEVKGIAYRAFWSQRRAGGKPDGNLQQPKAELANVA
DGQILAVKVTEIRDLIAQITGLDFGRFTKSILLSQGEFDAFLNAKEKERADLLEEITGTE
IYSQISIYIYNQHKQVKNELDLLKARAQSINLLTESEHQALLEKQTELAQQETLTDHKKN
TYQQAMNWYQQHHQLTERLQQLHLELQKSEHDFQAAQPSLKKLADSSPAEALRPLWQDVL
RQQQAFAEQTEKQKFVQQAREEAQKKLEPLKIQQQNTHNENTKFSVYMQQQHALIDSEVR
PLDNQIANLTMQSSELAKQVTRLQSEYDQKQQIVSEIENQIHQSDTQLQQLNTFLEKNQK
DAEINALLGRWKQQGHYLNELAIQLEETDQKQQKLTDEQTQLQQQQQDKSAQLALLQTAL
AQDTATLAKTEAEYKNNQEKQNIDILNQSILPLQTRLQSAQLLPFILSQFETLQTQSLKQ
IKQQQLLADAIAKNQNDTAIIQANIDKLEPHIHDVTVRLQLEQKIVSLEMERQQLVEGSP
CPLCGSHQHPAVEAYQGIKPTSTQQKLKELTEQLEKDKQQLSEQKSALQNNQLRLDENLQ
LKSELAEQSNNLNQKWHDTCQQALTPELAKNEQAVDLLLSDLQSQLATQQKIIHDFITLE
RHYQQTKDKLREKETQCKQQQSALELLNERLKYNVQQLNEIEKVKAQQQQRKNEQTAQLQ
ASLAQFNLVLPENGLFDVWFDSIEQRSQLYQTQKISAQNLAQKIAVDHATLKAEIVQKNQ
LDQQLIAIKQQQRQTNTELLQKQTHRQTLLEGHQVSQFIERMQVQQTQLAQALELSTKQI
NDVEKTIAVLNGSHQELVESIEKTSQLLANTQAQFNQALQLSPFDSQQAFLDALLDPEEK
TQLEQLKQKVSEILIQSKTRHKEGLLALTSHEQNRLDDFVNIAEEQIQHSIALFDNEIKE
LNQQQGRIISQLETDKQQRHQQRDLLQEIEKGQLNYDDWSYLSTLIGSAEGDKFRRYAQG
LTLDCLVSLANQQLDKLHGRYLLQRSHQANLELQVIDSWQADSIRDIKTLSGGESFLVSL
ALALALSDMVSNRTQLESLFLDEGFGTLDAETLDIALDALESLNASGKTIGVISHVEAMK
ERIPVQIPVKKANGLGFSELPAQYRVN
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctaagtctacgcctgaaaaacattaactccctcaaaggcgaatggaagatt
gatttcacgcaggaaccttttgctagccaagggttatttgccattactggggcgacgggt
gcgggtaaaaccactttactcgatgcgatttgccttgcgctataccaccaaacaccgcgc
ttagggcccatttcagctagccaaaacgaactgatgactcgccatacgggagaatgtttg
gccgaagttgaatttgaagtgaaaggtattgcgtatcgtgcattttggagccagcgccgc
gccggaggtaaacctgatgggaacctgcagcaacctaaggctgaacttgctaatgtggct
gatgggcagatattggcggttaaagtcaccgaaattcgcgatcttatcgcccaaattacc
ggattagattttggccgttttaccaaatctattttactttctcagggggagtttgacgcc
tttttaaatgccaaagaaaaagaacgcgcagacctgttggaagagatcaccggaaccgaa
atctatagccaaatatcaatttatatttataaccagcacaaacaagttaaaaacgaactc
gatttactcaaagctagggcgcaaagtattaatttactcactgaatctgagcatcaagcg
ctattagaaaaacaaacagaattagctcaacaagaaacactgacggatcataaaaaaaac
acctatcagcaagcgatgaattggtaccaacaacaccatcaactcactgagcggttacaa
caattacaccttgaattacaaaaatcggagcatgactttcaagcggctcagccaagctta
aaaaaattagccgacagttcccccgcagaggctttacgccctttatggcaagacgtttta
cggcagcagcaagcttttgcggaacaaactgaaaaacaaaaattcgttcagcaagcacgg
gaagaggcacaaaaaaaacttgagccacttaaaattcagcagcagaacacgcacaacgaa
aatacaaaattttcagtttatatgcagcagcagcatgcactgattgatagtgaagttcgc
cctttagacaaccaaatcgctaacctgacaatgcaatctagcgaacttgccaaacaagtg
acacgcttgcaatctgaatatgaccaaaagcagcagatcgtcagtgagattgaaaatcag
atccatcaatctgatacacaattacaacagctcaatactttcttagaaaaaaatcaaaaa
gatgctgaaatcaatgcgttattaggacgttggaagcaacaaggtcactaccttaatgag
ttagcaattcagcttgaggaaacggatcaaaagcagcaaaaattgactgatgagcaaaca
caattacaacagcagcagcaggataaatcggcgcaattagctctgctacaaactgcttta
gcccaagacaccgctacattggctaaaacagaggctgaatataaaaataatcaagaaaaa
caaaatattgatattctcaatcaatccatcttaccgcttcaaacaaggctacaatcggca
caattactgccgtttattttgtcacaatttgaaactctgcagacacaatccctaaaacaa
ataaaacagcaacaattgctcgcggatgcaatcgcaaaaaaccaaaatgatacggcaatc
attcaagcgaatatcgataaattagaaccccatattcacgatgtgaccgtgcgcctccag
ctagaacaaaaaatcgttagcttagaaatggagcgccaacagttagttgaaggttcacca
tgcccattatgcggctctcatcagcatcctgcggttgaagcgtatcaaggcataaaacca
accagtacccagcaaaagctgaaagaattaacagaacagctagaaaaggataagcaacag
ctatccgaacagaagtctgctttacaaaataaccagctacgcctagatgaaaatttacag
ctaaagtccgagctcgctgagcaatctaacaacctgaatcaaaaatggcatgatacctgc
caacaagcgcttacccctgaacttgctaaaaatgaacaagctgttgatttactgctttct
gatttgcaatcgcaactcgctacccagcagaagatcattcatgatttcattacattagaa
cgacattaccaacaaactaaagataagctacgagagaaagaaacacagtgtaaacagcaa
caatccgctttagagctactgaatgaacgccttaaatataacgttcagcaactcaatgaa
atagagaaagtaaaagcgcaacaacagcaacgtaaaaatgaacaaactgcacaattacag
gcttcactggcacaattcaatttagtcttacctgaaaatggcttatttgatgtctggttc
gatagcattgagcagcgtagccagctttatcaaacgcaaaaaatttcggctcaaaattta
gcacaaaaaatagcagtggatcatgccacattgaaagcggaaattgtgcaaaagaatcag
cttgatcaacagcttattgcgataaaacagcagcaacggcaaacaaatactgaactactg
caaaaacaaacccatcgtcaaacgttgcttgaagggcatcaggtaagccaatttattgag
cgcatgcaagtgcaacaaacccagcttgcacaagcgctcgaattatcgacaaaacaaata
aatgatgttgaaaaaacgatcgctgtgctcaatggtagccaccaagaattagttgaatca
atagaaaaaacaagccaattattagcaaatacccaagcgcaatttaatcaagcattacaa
cttagcccattcgattcacagcaggccttccttgatgcattactcgatcctgaagaaaaa
acacaactagagcaattaaaacaaaaggtaagtgaaattctaatacaaagtaaaactcgc
cataaagaaggtttacttgcgctcacttcccatgagcaaaatcgccttgatgactttgtg
aatatcgccgaagaacaaattcagcattctatcgccctatttgataacgaaataaaagag
cttaatcaacagcaaggtcgaattatcagccaattagaaaccgacaaacaacaacgccat
caacaacgagatttactgcaagaaattgaaaaaggccagctcaactatgatgattggagt
tatctcagtacattgattggctcagcggaaggggataaattccgccgctatgcacaaggt
ttaacactagattgtctggtttctttagctaatcaacagctcgataagctgcatggacgt
tatctacttcaacgcagccatcaagctaatctggagcttcaagtgattgatagttggcaa
gccgatagtattcgcgacatcaagacattatcgggcggtgaaagcttcttagtgagtctc
gcgttagctctggcactttcggatatggtaagtaaccgaacgcagttagaatcacttttc
ctcgatgaaggctttggaacattagacgcagaaacgttagatatcgcgctcgatgcatta
gaaagtctaaatgcttctggcaaaacgatcggggtgatcagccatgtggaagcaatgaaa
gagcgtatcccagtgcaaattcccgttaaaaaagccaatggccttggcttcagcgaactt
cctgcacagtatcgcgttaattaa
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