Providencia heimbachae: NCTC12003_00713
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Entry
NCTC12003_00713 CDS
T05509
Symbol
sbcD
Name
(GenBank) Nuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
phei
Providencia heimbachae
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phei03400
]
NCTC12003_00713 (sbcD)
DNA repair and recombination proteins [BR:
phei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC12003_00713 (sbcD)
Archaeal homologous recombinant proteins
NCTC12003_00713 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
SQH12036
LinkDB
All DBs
Position
1:complement(818206..819426)
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AA seq
406 aa
AA seq
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MRIIHTSDWHLGQYFFTKSRAAEHQHFLNWLIEQVTLHQVSAVIVAGDIFDTGSPPSYAR
ELYNKFIVDLQKTGCQLVILSGNHDSVSVLNESSSLLTYLNTNVITSGVEPNVITLTDKQ
KQPNGLVCAIPFLRPRDIQLSVAGQSIEEKQLSLQTAIHNYYQASYQLAVEQRNALGLDI
PIIATGHLTVIGAALTDSVRDIYIGTLDAFPSGAFPPADYIALGHIHRPQIIGGQHHIRY
CGSPIALSFDEAQQPKSVCLVEFNGSALTEVTPLTIPISQPLQSIKGSLQEIQQQLEVCR
DYQGEKPVWLDIEVASQDYLADIQQRIETLTETLPVEVVLLRRARKQRQGKLDVLPNESL
NELTAEEVFLRRLAEESLDDTDREQRLKQLFKQSFDALRSEQEGQA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattattcatacttccgactggcatcttggccagtatttttttacgaaaagccgt
gcagctgagcaccaacactttttaaattggctaattgagcaagtcactctacaccaagtc
agtgccgtgattgtcgctggcgatatttttgataccggctcaccaccgagctatgcacgt
gagctatataataaatttattgttgatttgcaaaaaaccggatgccaattagtcatttta
agtggcaatcatgattctgtttctgtcctaaatgaatccagttcactactaacttacctc
aatacaaacgtgatcacttctggggtagaacccaacgtcattacgctaaccgacaaacaa
aaacagcccaatggcctagtttgcgcgatcccatttctacgccctcgtgatattcaactg
agtgttgcaggtcagagtattgaagaaaaacagctatcgctacaaactgccatccacaat
tattatcaagcaagttaccaacttgccgtcgagcaaagaaatgcgcttggtttagatatt
cccatcattgctaccggccatttaaccgtcatcggtgccgcgttgactgactctgtgcgt
gatatctatattggtacactcgatgcgtttccatccggtgcattccccccagctgactat
attgcgcttggccatattcatcgcccacaaataattggtgggcagcaccatattcgctac
tgtggctcacccattgccctcagctttgatgaggctcaacaacccaaaagtgtttgttta
gttgaatttaatggcagcgccttaacggaagttacgccgttaacaatcccgatttcccaa
ccattacaaagtatcaaagggtcattacaagagattcaacaacagttggaagtttgccgt
gattatcagggtgaaaaaccggtttggctggatatcgaagtcgcctctcaagactacctt
gcagatattcaacaacgcatcgaaaccttgaccgaaacattgcccgttgaagttgtttta
ctgcgccgagcacgcaaacaaagacaagggaaactcgatgtactcccgaatgaaagctta
aatgaactcaccgctgaggaggtattcctacgccgtctcgcagaagaatcacttgacgat
actgaccgagaacagcgcttgaaacagctgttcaagcaatcttttgacgcattacgttca
gagcaagaggggcaagcatga
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