Providencia heimbachae: NCTC12003_00952
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Entry
NCTC12003_00952 CDS
T05509
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
phei
Providencia heimbachae
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phei03016
]
NCTC12003_00952 (truD)
Enzymes [BR:
phei01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NCTC12003_00952 (truD)
Transfer RNA biogenesis [BR:
phei03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC12003_00952 (truD)
Prokaryotic type
NCTC12003_00952 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
SQH12262
LinkDB
All DBs
Position
1:1072233..1073291
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AA seq
352 aa
AA seq
DB search
MKAMNVQYLHGKPRSSGKLKSIPEDFIVKEDLGFELDGDGEHVMVRVEKTGCNTLFVAEQ
LAKFAKISARAVSYAGLKDRHAVTEQWFCLQMPGKETPDFSTWQLEGCRVLATTRQKRKL
RIGTLKGNQFEITLRDISEPNDVEQRLQKIAESGVPNYFGEQRFGRGGQNLTQALRWANQ
EISVRERSKRSFYLSAARSAMFNHIASERIINNIAQQAILGDALQLTGRGSWFVATAEEL
STLQARLLSSELSVTAPLPGDGELGTQDDALAFETQCLENYQPFIALMKSERVSPVRRAV
VIKPQNLQWQWLNDTTLKLNFFLNSGSFATSVVREIINQDSQDSVDAKDFIE
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctatgaacgtacagtacctgcatggtaaaccacgatcttctggcaaacttaaa
agtatcccagaagattttatcgtaaaagaagatttgggttttgagcttgatggggatggc
gaacatgtgatggttcgtgtcgaaaaaacaggctgtaatactttatttgttgctgaacaa
ctggctaaatttgctaaaatttcagcgagagcagtaagttacgcgggtttaaaagatagg
catgcggtcactgagcaatggttttgtttacagatgcccggtaaagagacgcctgatttt
tcaacatggcaacttgaaggctgccgagtgttagcaacaacgagacaaaaaagaaagttg
cgcattggtacgttgaaaggaaaccagtttgagataacgctgcgtgatatctctgagcca
aatgacgttgaacaacgcctacaaaaaattgcggagtcaggtgtgccaaactattttggt
gagcaacgttttggtcgaggtggtcaaaatttgacccaagcacttcgctgggcaaatcaa
gagattagtgttcgagagcgtagtaagcgaagcttttatttatcggctgctcgcagtgca
atgtttaaccacattgccagtgaacgcataatcaataatattgctcagcaggctatatta
ggtgatgcattacagcttactggccgggggagttggtttgtagcaacagcggaagaatta
tcaacgctacaagcacgtttgttatcatcagaattaagtgttactgcaccacttccggga
gacggggagttagggactcaggatgatgcacttgcttttgaaacgcaatgcttagaaaat
tatcagccttttattgcgctgatgaaaagcgagcgagtttctccggtgagaagggctgtg
gttataaaaccacaaaacttacaatggcagtggctaaatgatacaacgctaaaactgaat
tttttcttaaattcaggtagttttgcaaccagtgtcgtgagagaaattatcaaccaagat
agtcaggatagtgtcgatgctaaagattttattgagtaa
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