Providencia heimbachae: NCTC12003_00956
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Entry
NCTC12003_00956 CDS
T05509
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor rpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
phei
Providencia heimbachae
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phei03021
]
NCTC12003_00956 (rpoS)
Transcription machinery [BR:
phei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC12003_00956 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
SQH12266
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All DBs
Position
1:1076085..1077071
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AA seq
328 aa
AA seq
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MSQSSLKVNELYNDLDESSSDDAFDESQFKEEDLVSELEDEMDLLQSTTARVLDATQIYL
SEIGFSPLLTAEEEVFYSRRALRGDIPSRQRMIESNLRLVVKISRRYNNRGLALLDLIEE
GNLGLIRAVEKFDPEKGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNIYLRTA
RELAQKLDHEPSPEEIALKLDKPVEDVSRMLRLNERITSVDTPIAGDSEKSLLEVLSDEN
DSGPENTIQDNDLKDNIVKWLFELNPKQREVLARRFGLLGYEAETLEEVGREIGLTRERV
RQIQVEGLRRLKDILHNEDLTLESLFNM
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaagttcgctgaaagttaacgagttatataatgaccttgatgaaagtagttcg
gatgatgcttttgatgaaagtcagtttaaagaagaggatctagtttcagaactcgaagat
gaaatggatttactccagagcaccactgcgcgtgttctggatgctacccaaatttatctc
agtgaaattggattctcaccgctcctaacagccgaggaagaggttttctattctcgtagg
gctttacgcggtgatattccatcacgtcagcgtatgattgaaagcaacctccgtctggtt
gtaaaaatatctcgtcgttataataaccgaggactcgccttactcgatttgattgaagaa
ggtaatcttgggttgattcgtgcagttgaaaaattcgatccagaaaaaggatttcgtttt
tcaacctatgccacttggtggatccgtcaaacgatcgagcgagccatcatgaatcaaacc
agaacgattcgccttcctattcatattgtaaaagaactcaatatttaccttcgtacggca
cgtgaattagcgcagaagctcgatcatgagccaagccctgaagaaattgccctaaaatta
gataaacctgttgaagacgttagtcgaatgctacgtttaaatgaacgtattacttcggtg
gatacgccgattgcgggggattcagaaaagtctttacttgaagtactctctgatgaaaat
gattcagggccagaaaatacaattcaagataatgacttaaaagataacattgttaagtgg
ttatttgaactgaatccaaaacaacgcgaagtcttagcgcgtcgttttgggcttttaggc
tatgaagcagaaactctagaagaggttgggcgcgaaattgggctcactcgtgaaagagtt
cgccagattcaagtagaaggtttgagacgtctcaaagatattttacataatgaagattta
acgttggaatcgttattcaatatgtaa
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