Providencia heimbachae: NCTC12003_01065
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Entry
NCTC12003_01065 CDS
T05509
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
phei
Providencia heimbachae
Pathway
phei03030
DNA replication
phei03430
Mismatch repair
phei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12003_01065 (dnaX)
03430 Mismatch repair
NCTC12003_01065 (dnaX)
03440 Homologous recombination
NCTC12003_01065 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phei03032
]
NCTC12003_01065 (dnaX)
03400 DNA repair and recombination proteins [BR:
phei03400
]
NCTC12003_01065 (dnaX)
Enzymes [BR:
phei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC12003_01065 (dnaX)
DNA replication proteins [BR:
phei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC12003_01065 (dnaX)
DNA repair and recombination proteins [BR:
phei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC12003_01065 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_4
AAA
RuvB_N
AAA_22
AAA_5
AAA_14
AAA_30
ResIII
AAA_18
PIF1
AAA_2
AAA_19
AAA_assoc_2
TsaE
AAA_7
AAA_16
nSTAND3
AAA_24
Motif
Other DBs
NCBI-ProteinID:
SQH12375
LinkDB
All DBs
Position
1:1214196..1216139
Genome browser
AA seq
647 aa
AA seq
DB search
MSYQVLARKWRPQKFSDVVGQQHVLTALANGLEHQRLHHAYLFSGTRGVGKTTIARLFAK
GLNCEAGITATPCGKCANCLEIEQGRFVDLIEIDAASRTKVEDTRELLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
TQISEQLELILNAENIEHDQRARQLIARAADGSLRDALSLTDQAIAMGEGKVTADIVSQM
LGTLDDEQPLAIIEALVRADGAGVMTQVQQAASRGADWENLLVEILSLLHRIAMIQLLPA
EQETDPSSTEGRLRQVARVISPADLQLFYQTLLVGRKELPFAPERRMGIEMALLRALAFH
PKSVIAEIEVPPKLVQSVPNQVIQPEIPAVTNRPVTQRISPENLPENSPTLQLLKARQAL
QVPQNEDPDSKKNKPAMPEKAKPAASALERLAAVTSKHQQNIANKASGTVKPEKPKQYQW
RSQNEEVIEPKNTITTPTEIKEALEYEKTPELAVKIIEESRERDSWSGEIAQLNIPKLVE
QLALNSYKEEIDESQIVLHLRSVQRHLDKPSAHQALQEALSQHYGRTLELKIVQDDNIAV
KTPLEWRQAIYEEKLAQARQSIIADKTIQKLRTMFDAQLDEESIRPV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggtacttgcccgtaaatggcgcccccaaaaattttcagacgttgttggc
cagcagcatgtcttgaccgcacttgcgaatgggctggagcatcagcggcttcatcacgcc
tatcttttctcgggtactcgcggtgtaggtaaaaccacaattgcccgtttatttgcgaag
ggtctcaactgcgaagccggtattaccgccaccccttgcggtaaatgtgctaactgccta
gaaatcgaacaaggtcgctttgttgatttaatcgaaattgatgcagcgtctcgaacgaaa
gttgaagacacgcgtgaattacttgataacgtacaatacgcacctgcgagagggcggttt
aaagtctatttgattgatgaagtgcatatgctttctcgtcatagctttaatgcgttattg
aaaacccttgaagaaccaccagagcatgtgaaattcttacttgcgacgacggacccacaa
aaactgcctgtgacgatactgtctcgctgcctgcaatttcatcttaaagctttggatgtg
acgcaaatcagcgagcaacttgagcttattctcaatgctgaaaatattgaacatgatcaa
cgtgcgcgccagcttattgctcgggctgccgatggcagcttacgtgatgcattaagttta
actgaccaagctattgcgatgggtgaaggtaaagtcactgcggatatcgtgagccaaatg
ctgggaacgctagatgatgagcagcctttagccattatcgaagcattagttcgtgccgat
ggtgctggagtgatgacgcaagttcaacaagctgcatctcggggagctgactgggaaaat
ttattagttgagattttatctttactccatcgcattgcgatgatccagcttttgcccgca
gaacaagaaacggacccgtcatcgactgaaggtcgtttaaggcaagttgcgagggttatc
tctcccgcagatttacaacttttttatcaaaccttactggtgggaagaaaagagctacca
ttcgcgccagaaaggcgcatgggaattgaaatggcattgctacgcgcattggccttccat
cctaaaagtgtgatagctgaaattgaagtaccaccaaaattggttcaaagcgtaccaaat
caagtaatacagccagaaatacccgctgtaaccaaccggcctgtaactcagcgaatcagt
cctgaaaacctgccggaaaatagcccgaccttgcaattgttaaaagcgcggcaggcgcta
caagttcctcaaaatgaggatcctgactcaaaaaagaataaaccggcgatgcctgaaaag
gctaagccggcggcatcagcactagaaaggctggccgcggtgaccagcaagcatcaacaa
aatattgcgaataaagcctcgggaacagtaaagccagaaaaaccaaagcagtatcagtgg
cgatcgcaaaatgaagaagtcattgaacccaaaaatacgataacgacaccaacagaaatt
aaagaagcgttagagtatgaaaaaaccccggagctggcagttaaaattattgaagaatcc
cgagagcgagatagttggtctggcgaaattgcgcaattaaatattcctaagctggttgaa
caattggctttgaattcatataaagaagaaatagacgagtcgcaaattgttttacatctg
cgatctgttcagcgccatcttgataagccaagcgctcatcaagcactgcaagaggcatta
agccagcattatggtcgcactcttgaactgaaaatcgttcaagatgataatatagcggtc
aaaacaccgcttgaatggcgacaggcaatttatgaagaaaagctggcgcaagctcgtcag
tccattattgcggataaaacaattcagaagctgcgcaccatgtttgatgctcagcttgat
gaagaaagtattcgccccgtttaa
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