Providencia heimbachae: NCTC12003_01248
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Entry
NCTC12003_01248 CDS
T05509
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
phei
Providencia heimbachae
Pathway
phei00470
D-Amino acid metabolism
phei00550
Peptidoglycan biosynthesis
phei01100
Metabolic pathways
phei01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC12003_01248 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCTC12003_01248 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NCTC12003_01248 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phei01011
]
NCTC12003_01248 (ddlB)
Enzymes [BR:
phei01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
NCTC12003_01248 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
phei01011
]
Precursor biosynthesis
Amino acid ligase
NCTC12003_01248 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATPgrasp_ST
ATP-grasp_3
TTL
ATP-grasp
RimK
ATPgrasp_Ter
ATPgrasp_YheCD
Csa1
Motif
Other DBs
NCBI-ProteinID:
SQH12554
LinkDB
All DBs
Position
1:1422155..1423075
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AA seq
306 aa
AA seq
DB search
MTEKVAVLLGGTSAEREVSLQSGSAVLKGLCQAGIDAHPIDTKDFPVVTLKEAGFDKVFI
ALHGRGGEDGTIQGMLEFLGLPYTGSGVMASALSMDKLRTKQLWQGAELSVSPYISLTKQ
QYTQMTEAQIAQQAKPLGLPLIVKPSLEGSSVGMSKVDSLDKLSSAIELAFEFDETLLIE
KWLSGPEYTVAVLGNETLPSIRIQPPGIFYDYEAKYLSDETQYFCPSGLDAQRESELATL
AMQAYQAVGCRGWGRVDVMQDSDGQFYLLEVNTSPGMTSHSLVPMAANQAGLDFSQLVVR
ILELAR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaaagttgcggttttattaggaggaacatctgctgaacgtgaggtttcactt
cagtcaggaagcgctgtgctaaaagggctttgccaagcaggcattgacgcgcaccctatt
gataccaaagatttccctgtggtgacactaaaagaagccggttttgataaagtctttatc
gcattacatggtcgcggcggtgaagacggtactatccaaggcatgcttgaatttctcggt
cttccatacacaggcagtggtgtaatggcctcagccttaagtatggataagctaagaact
aaacaactttggcaaggtgctgagctgagtgtatcgccttatatctcgttgacgaaacag
caatatacacaaatgactgaagcgcaaattgctcagcaagctaagcctcttggattgcca
ttgatagttaaaccaagcttggaaggctcaagtgttggtatgagtaaagttgatagttta
gataaattatcctcagccattgaactggcatttgaatttgacgaaacattgctaattgaa
aaatggttgagtggtcctgaatatacggttgctgtgttgggtaatgaaacattaccgtca
attcgtattcaaccaccgggtattttttatgactatgaagcaaagtatctctctgatgag
actcaatatttttgcccaagtggtttagatgctcagcgagaatctgaacttgcgacgctt
gcgatgcaagcatatcaagcggtgggttgtcgtggatggggtcgagttgatgtcatgcaa
gacagtgacggccaattttatttgcttgaggtgaatacttcaccgggcatgactagccat
agccttgtgccgatggcagcgaatcaagcaggattggatttctcacaattagttgtgcgt
attttggaattggctcgttga
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