Providencia heimbachae: NCTC12003_01303
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Entry
NCTC12003_01303 CDS
T05509
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
phei
Providencia heimbachae
Pathway
phei03410
Base excision repair
phei03430
Mismatch repair
phei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC12003_01303 (recJ)
03430 Mismatch repair
NCTC12003_01303 (recJ)
03440 Homologous recombination
NCTC12003_01303 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phei03400
]
NCTC12003_01303 (recJ)
DNA repair and recombination proteins [BR:
phei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NCTC12003_01303 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NCTC12003_01303 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC12003_01303 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF2065
Motif
Other DBs
NCBI-ProteinID:
SQH12607
LinkDB
All DBs
Position
1:1480192..1481925
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AA seq
577 aa
AA seq
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MNVETFLRQRVQSDEVIMLPGVPRLLQRIYAHRGITNATQLERKASNLLDYHSLFGIENA
LVLLYQALTEHSSITIVGDFDADGATSTALAIRALKAMGYANLNYIVPNRFENGYGLTPL
VVEEAHKRGAELIITVDNGISSHEGVATANEHGIKVIITDHHLPGATLPNADAIINPNLN
ECHFASKSLAGVGVTFYLMSALRAHLRQQGWFTQQGLSEPNLAEFLDLVALGTVADVVPL
DMNNRILVHQGLQRVRAGRCCAGIKALIEVSKREASRLVANDFGFALGPRLNAAGRLDDM
SVSIELLLTDDMAYARELANELDGLNQTRRDIEAGMQQEALVLFNKVEYSTNQLPNGLAL
YHPEWHQGVVGILASRIKEQYHRPVIAFAPAGDGVLKGSGRSVQGVHMRDALERLNTLQP
GLMQKFGGHAMAAGLTLEENNFDAFKLHFEQLMGELIQPEQLAGVIWSDGELTRNEFSLE
VAELIRDSGPWGQSFPEPVFDGHFQLLQQRLVGERHLKLMLEPVNGGPMLDAIMFNIDVR
RWPDNSIKKAKIAFKLDVNEYRGQKNVQLMIEHIWPE
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgttgaaacctttttacgtcaacgcgtccaaagtgacgaagtgatcatgctaccg
ggggttcctagactcttgcagcgtatttatgcacaccgcggcataacaaatgcgacgcaa
ctagaacgcaaagcctccaatcttttagattatcattcattatttgggattgaaaatgcc
cttgttctgctttaccaggcattaacagagcatagttcaattaccatcgttggggatttt
gatgccgatggggcaacgagtactgcccttgcaattcgggcattaaaagccatggggtat
gcaaatttaaattacatcgtgcctaatcgttttgaaaatgggtacgggttaacgccactt
gttgttgaagaagcgcacaagcgtggtgctgaattaattatcaccgttgataatggaatt
tcatcccatgaaggtgttgcgaccgcaaatgagcatgggataaaagtgatcattactgac
caccatttacccggcgctacgttaccaaatgcagatgcgatcattaacccaaacctcaac
gaatgtcattttgcgtcgaaatctttagcaggggtcggggtcacgttttatttgatgtct
gccttgagagcgcatttacgtcagcaaggttggtttacgcaacaagggcttagtgaacct
aatttggccgaatttttagacttagtggctttaggtactgtcgctgacgtcgtccccctt
gatatgaataaccgtatccttgttcatcaaggtttacaacgcgttagggctgggcgttgt
tgtgcaggtatcaaagcgttgatcgaagtttctaagcgggaagcctctcggttagtggca
aatgactttggctttgcattagggcctcgattgaatgcagcggggcggttagatgacatg
tccgttagtattgagctattgctcaccgatgatatggcttatgcaagggagcttgctaac
gaattggatggtttaaaccaaacaagacgtgatatcgaagcgggaatgcaacaagaagcc
ctcgtactgttcaacaaagttgaatatagcaccaatcaattacccaatggtttggcgctg
tatcacccagaatggcatcaaggggttgttggtattttagcttcaaggattaaagagcag
taccatcgaccggttattgcgtttgcgcccgcaggtgacggtgtactcaaagggtctggt
cgttcagttcaaggtgttcatatgcgagatgcattagagcgtttgaatacactacagccc
ggattaatgcaaaaatttggcggccatgcgatggcggcgggcttaaccctcgaagagaac
aattttgacgcatttaaattgcattttgagcagcttatgggggagcttattcaacctgag
caactcgctggtgtgatttggagtgatggtgagctgacccgcaatgaattttcattagaa
gttgcagagcttattcgcgatagtgggccttgggggcaatcattcccagaacctgttttt
gatgggcattttcaattgctacaacagcgattagtgggtgaacgtcaccttaaactgatg
ttagaacccgtaaatggtggtcctatgttagatgccattatgtttaatattgatgttcgc
cgatggccagataacagcattaaaaaagcaaaaatagcatttaaacttgatgtcaatgaa
taccgcgggcaaaaaaatgtgcaattaatgattgaacatatttggcctgagtaa
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