Providencia heimbachae: NCTC12003_01305
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Entry
NCTC12003_01305 CDS
T05509
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
phei
Providencia heimbachae
Pathway
phei00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NCTC12003_01305 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
phei01007
]
NCTC12003_01305 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phei03016
]
NCTC12003_01305 (lysS)
Enzymes [BR:
phei01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
NCTC12003_01305 (lysS)
Amino acid related enzymes [BR:
phei01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NCTC12003_01305 (lysS)
Transfer RNA biogenesis [BR:
phei03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NCTC12003_01305 (lysS)
Prokaryotic type
Other AARSs
NCTC12003_01305 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
AsnA
Motif
Other DBs
NCBI-ProteinID:
SQH12609
LinkDB
All DBs
Position
1:1483193..1484710
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AA seq
505 aa
AA seq
DB search
MSQEQQGAEQVPDLNNELKARREKLAALREKGIPFPNDFRRENISNSLHAQYGDKSAEEL
EALNIEVTIAGRMMTRRIMGKASFATLQDVGGRIQIYVSRDDLAEGVYNEQFKKWDLGDI
LGAKGRLFKTKTGELTIHCHEVRLLTKALRPLPDKFHGLSDQETRYRQRYLDLIANDESR
NTFIIRSKILAEVRNFMVSYGFMEVETPMMQVIPGGATARPFVTHHNALDIDMYLRVAPE
LYLKRLVVGGFERVFEINRNFRNEGLSPRHNPEFTMMELYMAYADYRDLIALTEDLFRTL
TQKVLGNTVVQYGEQQFDFGQPFTKLTMKEAIYKYRPETNIADLDDMDKAVAIAQSLSIK
IEKSWGLGRIQCEIFEEVAESHLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGR
EIGNGFSELNDAEDQAERFAEQVRQKDEGDDEAMFYDEDYITALEHGLPPTAGLGIGIDR
MVMLFTNSHTIRDVILFPALRPTKA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagaacaacagggtgctgaacaagttcccgatttaaataacgaacttaaagca
cgtagagaaaagctagcggcattacgcgaaaaaggaattccattccccaatgattttcgt
cgtgaaaatatttcaaatagccttcatgcacaatatggtgataaatcagcggaagagctt
gaagcgctgaatatcgaagtcactattgcagggcgaatgatgactcgccgtattatgggg
aaagcatcatttgccactttgcaagatgttggtggacggattcagatttacgtttcacgt
gatgacttggcggaaggcgtatataacgaacagtttaaaaaatgggacttaggtgacatt
ttaggtgcgaagggtcgtttgtttaaaacaaaaacgggtgaattgaccattcattgtcat
gaagttcgtttactgacaaaagcattgcgtccactgccagataaatttcatggtttatca
gaccaagaaacgcgctatcgtcaacgttatcttgatcttattgcaaatgatgaatcacgt
aatacgtttatcattcgttctaaaattcttgctgaagtccgtaactttatggtcagttac
ggctttatggaagtcgaaacaccgatgatgcaggtgatccctggtggtgcaacagcgcgc
ccttttgtgactcaccataatgcattagatattgatatgtatctgcgtgttgcacctgag
ctttatttaaaaaggttagtggtcggtggctttgaacgcgtgttcgaaattaaccgtaac
ttccgtaatgaaggtttatctccacgccataatcctgagttcacgatgatggaactctat
atggcgtatgcagattaccgtgatctgattgcgctgacagaagatttattccgtacgttg
acacaaaaagtgcttggaaataccgttgttcaatacggtgaacaacagtttgattttggt
cagccatttactaaattgacgatgaaagaagcaatttacaaatatcgcccagaaacgaat
attgccgatcttgatgatatggataaagcggttgctatcgctcaatcactgagtatcaaa
attgagaagagttggggactcggtcgtattcagtgtgaaatttttgaagaagttgcggaa
agccacttaattcaaccgacttttatcactgaatacccagcagaagtttcacctcttgcc
cgacgtaatgatgacaatccattcattactgatcgctttgagttctttattggtggacgt
gaaataggtaatggtttctctgagttaaatgatgcagaagaccaagctgagcgttttgca
gagcaagttcgccaaaaagacgaaggtgatgatgaagccatgttctatgatgaagattat
atcactgcattagaacatggcttgccaccaacagcaggcttaggtattggtattgaccgc
atggtcatgttatttaccaacagtcatactatccgtgatgttattctattccctgcatta
cgtcctaccaaagcgtaa
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