Providencia heimbachae: NCTC12003_01325
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Entry
NCTC12003_01325 CDS
T05509
Symbol
prpR
Name
(GenBank) Propionate catabolism operon regulatory protein
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
phei
Providencia heimbachae
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phei03000
]
NCTC12003_01325 (prpR)
Transcription factors [BR:
phei03000
]
Prokaryotic type
Helix-turn-helix
Other families
NCTC12003_01325 (prpR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA
HTH_11
RWP-RK
Xre-like-HTH
HTH_23
HTH_psq
HTH_Tnp_ISL3
AAA_2
HTH_30
DUF815
Parvo_NS1
HTH_17
AAA_7
SLFN-g3_helicase
NACHT
Motif
Other DBs
NCBI-ProteinID:
SQH12629
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Position
1:1508720..1510300
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AA seq
526 aa
AA seq
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MEKPIIWTVSVSRLYTLFRDISPEFSAQAEITPLNIGFEQASEEVRRRLKDGHCDAIISA
GSNGAYLKSHVSVPVIIVKVSGFDVMQALAKAREISNKVAIINYQKIIPSLAEFQNNFGL
RIEQRSYVTAEDARAQLKALKAMGIHVVVGAGLITDLAEEMGMTGIFIYSTETIRQAFSD
AIELSRMSHHQKNNIQAAYQPAHPAKVRHTINDLIGMSAAMERVRQTIMLYARSDATVLI
QGNSGTGKEMVAQAIHHEFTLFNQHKRSKQQMPFVAVNCGAIPETLLEAELFGYEEGAFT
GSRRGGRAGLFEMANGGTLFLDEIGEMPIALQTRLLRVLEERSVVRIGGYRPLQVNVRVI
CATHCDLDNWVKEGRFRADLFYRLGVLRMQVPALHERGDDIFILAERLLKLAFSRLELPL
PAFRVQQLLQCRHFFNQYQWPGNVRELRNLMERVALFCSAYTDKTISDDMLMNLSPERQK
NTIDDNKVEQIEEPLEEIMARFGGNKQAAAQYLGVSRTTLWRRLKT
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaccgataatttggacggtctctgtatcgaggctatataccctttttcgggat
attagccctgagtttagtgcgcaagcggaaattacaccgctgaatattggctttgaacaa
gcttctgaagaggtgcgtcgccgtctcaaggatgggcattgtgatgctattatcagtgca
ggctccaatggcgcatacttaaaaagtcatgtttcagtaccggttattatcgttaaagtc
agtgggttcgatgtgatgcaagcactggctaaggcgagagaaataagcaataaagtcgct
attattaattatcaaaaaatcatcccttcattagcagaatttcaaaataattttggtttg
cgcattgaacagcgaagttatgtcactgcagaagatgcccgtgcccaattaaaagcacta
aaagcaatgggaattcatgtggttgttggtgctgggttgatcaccgacttagctgaagaa
atgggcatgacgggtatttttatttattcaactgagaccattcggcaggcattctccgat
gcgattgagcttagccgtatgtcccaccatcaaaaaaataatattcaagcggcctaccag
ccagctcatcctgctaaagttcgtcataccattaatgatttaattgggatgtctgctgca
atggaacgcgtacgtcaaacaattatgctatatgcgcgttctgatgcaacggtcttaata
caagggaatagcggaacaggtaaagagatggtggcacaagcgatccaccatgagtttacc
ttatttaatcaacataaacgcagtaaacagcaaatgccatttgtagcagtcaactgcggg
gctatccctgaaacattattggaagctgaattatttggttatgaagaaggagcttttaca
ggatcacgaagaggtgggcgagcagggttatttgaaatggcaaatggcggaaccctattt
ctcgatgaaataggtgaaatgcctattgcattacaaacccgtttattaagggtattagaa
gagcgttctgttgttcgcatcggtggatatcgaccattgcaagttaatgtcagagttatt
tgtgcaacgcattgcgatctcgacaactgggtaaaagaagggcgttttcgtgctgattta
ttttaccgattgggtgtgctcagaatgcaagttcccgcattgcatgagcggggggatgat
atttttattttagcagaacgattacttaaattagcgttttctagactcgaactgccactt
ccagcgtttcgtgttcaacaattattacagtgtcggcattttttcaatcagtatcaatgg
ccaggtaatgtcagagaactcagaaatttgatggaaagggttgccttattttgtagcgca
tataccgataaaaccatcagtgatgatatgctaatgaacctttctcccgaaagacaaaaa
aacaccatagatgataataaagtagaacaaatcgaagagcctttggaagaaattatggcg
cgttttggtggtaataagcaagccgctgcccaatatttaggtgttagtaggactacgctg
tggcgtcgccttaaaacataa
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