Providencia heimbachae: NCTC12003_02103
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Entry
NCTC12003_02103 CDS
T05509
Symbol
gabR_1
Name
(GenBank) HTH-type transcriptional regulatory protein gabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
phei
Providencia heimbachae
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phei03000
]
NCTC12003_02103 (gabR_1)
Transcription factors [BR:
phei03000
]
Prokaryotic type
Helix-turn-helix
GntR family
NCTC12003_02103 (gabR_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_36
Asp_aminotransf
Aminotran_5
Fe_dep_repress
HTH_Crp_2
DnaD_N
OKR_DC_1
HTH_11
Rrf2
Motif
Other DBs
NCBI-ProteinID:
SQH13383
LinkDB
All DBs
Position
1:2340123..2341649
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AA seq
508 aa
AA seq
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MRCKQQAQFPLLLLDEGILKENSIKDSVYHTIRNAILDGRISTGIKLPSTRALAEMMSIS
RNSVIAGFERLTDEGYLYSKQGSGTYVSANIPDELVRTTNNPHATEHLEYTALNLNPMVN
HLTRSWNQSRPNTNKHQMFNIGIGCVDQFPHELWGRLLGRVWRKSKHVITHYNHPDGYSP
LKQLLVDYVRSTRGVHCSEKQIIIVNGTQQAINLAARVLLKQGDKVWLDDPGYDSAKAIL
MGQGAQIIPIPSDDEGMNIAYAAKYHPDAKLVYTAPSHQFPLGTTLSLARRLALLDWAQQ
NNAWVFEDDYNSEFRFLSKPIQALQGLDNHQRVIYAGTFSKMMYPGFRLGFLIVPEILSD
AFTMMKYYSDSHCSYLEQAALAQFIQEGHYARHVRKIRKICHERQNTFFTAINSYLPDIF
DVQLTDSGIHTVCWVKQGYDIDIILQQCRLLGFGAQPLSRYCINSKNNNAILFGYAAHAE
SDITNSVKLLSERLESIYSRSLNTNLDE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcgatgtaagcaacaagctcaatttccgcttctacttctagatgaagggatcctaaaa
gagaacagtattaaagacagcgtatatcacactattcgtaatgccatacttgacggaaga
ataagtacgggcatcaaactcccttcaaccagagcgttagctgaaatgatgtcgatttca
cgtaactctgtgattgccggttttgagcggttaactgatgaaggatatctctattctaag
caaggatctggcacatatgtttcagcaaatatcccagatgaactggttcgaacaacaaat
aacccacatgctactgaacatcttgaatatactgcacttaatctgaaccctatggttaat
catctcaccagatcatggaatcaatcacgccctaataccaataaacaccaaatgtttaat
atcggtattggttgtgttgaccaatttccacacgagctttggggaaggctattagggcgt
gtttggcgtaaatcaaaacatgtcattactcactacaatcatccagatggttattcacca
ttaaaacagttattagtcgattatgtacggtcaacccgaggcgttcactgctcagaaaag
caaattattatcgttaatggaacacaacaagccataaatcttgcagccagagtactactg
aaacaaggggataaagtttggttagatgacccgggctatgacagtgctaaagccatttta
atggggcaaggtgctcaaataatacctatcccatcggatgatgagggaatgaatatagct
tatgctgctaaatatcatcccgatgctaaattagtttataccgccccttcccaccagttc
ccgcttgggaccaccttgagtttagcccgccgattagctttattagattgggcacaacaa
aataacgcatgggtttttgaggatgattataatagtgagtttcgttttttatctaaaccc
attcaagcattacaaggactcgataaccaccaacgcgttatttacgcaggtacattttct
aaaatgatgtatcccggatttcgcctcggatttttaattgtgccagaaattctgagtgat
gcatttacgatgatgaaatactacagcgatagccattgtagctatttagaacaagccgcc
ttagcgcaatttattcaagaaggccactacgctcggcatgttagaaaaatacgtaaaata
tgtcacgaacggcaaaataccttttttactgcaattaactcatatctacctgatatattt
gatgtacagctgaccgattctggaattcataccgtatgttgggtcaaacaaggttatgat
attgatatcattttacagcaatgccgcttattaggttttggcgcacagccgctatcaagg
tattgtattaatagtaaaaataacaatgcaattttatttggttatgcagcacatgcagaa
tctgatattaccaatagcgttaaattgcttagtgaaagacttgagagcatatactctaga
tcactcaacactaatttagatgagtaa
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