Providencia heimbachae: NCTC12003_02155
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Entry
NCTC12003_02155 CDS
T05509
Symbol
dbpA
Name
(GenBank) ATP-independent RNA helicase dbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
phei
Providencia heimbachae
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phei03009
]
NCTC12003_02155 (dbpA)
Enzymes [BR:
phei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NCTC12003_02155 (dbpA)
Ribosome biogenesis [BR:
phei03009
]
Prokaryotic type
rRNA helicases
NCTC12003_02155 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
SQH13435
LinkDB
All DBs
Position
1:complement(2407173..2408546)
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AA seq
457 aa
AA seq
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MTSFAELNALPAEQLSNLNELGYLTMTPIQAAALPAILAGKDVRAQAKTGSGKTAAFGLG
LLQRIDAKQFNTQSLVLCPTRELADQVASELRRLARYIPNIKILTLCGGVPFSIQRDSLV
HAAHIIVATPGRLLDHLKKETVSLDALQTFVLDEADRMLDMGFLEAIEDVIACAPKQRQT
LLFSATWPEAIASISKRIQQEPLAIEINSVDELPAVEQQFYEISRHGKIDLLQKLLSREQ
PASCVVFCNTKKDCQDVFDALTESNQSVLALHGDMEQRDRDQTLVRFANGSSRVLVATDV
ASRGLDIKALEMVINYELSWDPEVHVHRIGRTARAGESGLAISLCAPEEAQRANALEEML
NMKLNWQPVPSGLKIIPLEAEMATLCIDGGKKTKMRPGDILGALTGDVGLDGADIGKIVI
HPMHAYVAVRRSVANQAWKKLQQGKIKGKNVKARLFK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgacctcatttgctgaactgaacgcacttcctgcggaacaactttctaatcttaatgag
cttggttacttaaccatgacgcctattcaggcggcggcgttaccagcgatcctcgcaggg
aaagacgttcgcgctcaagcaaaaacaggcagcggtaaaaccgccgcatttggcctcggt
ttattgcaacgtattgatgctaaacaattcaatacgcaatcacttgttttatgtccaacc
cgagaacttgctgatcaggtggcgagtgaattacgccgtcttgctcgttatattccaaat
attaaaatattaaccctttgtggcggtgtgccatttagcatccagcgtgactctcttgtt
catgcggcacatattattgtggcgacaccgggtcgtttgcttgatcacttaaaaaaagaa
acggtcagccttgatgcgctgcaaacatttgtactagatgaagcagatcgcatgcttgat
atggggtttcttgaggccatagaggatgttattgcttgcgcgccgaaacagcgtcaaacc
cttttattttcggcgacttggccggaggcaattgcgtcaattagcaaacgcatccagcag
gaaccactggcgattgaaatcaattcagttgatgagttgcctgcggtagagcaacaattt
tatgaaatttcccgtcatggtaaaattgatttattacaaaaattgctgagccgtgaacag
ccagcatcttgtgttgtattttgtaataccaaaaaagattgccaagacgtatttgatgcc
ttaactgaaagtaatcaaagtgttctggcattacacggcgatatggaacagcgcgatcgt
gaccaaacattagtacgctttgctaatggaagcagccgagttctggtagcaaccgatgtt
gcttcccgtgggcttgatatcaaagcactagaaatggtcattaactacgagctttcatgg
gatccagaagttcacgttcaccgtattggtcgtactgctcgtgcgggggaaagtgggtta
gcaattagtctgtgtgcgccagaagaagcacagcgtgctaatgccttagaagaaatgctt
aatatgaagctgaactggcagccagtgcctagtggattaaaaattatcccattagaagct
gagatggcaacgctttgtattgatggtggcaagaaaacaaagatgcgcccaggggatatc
ttaggtgcgctaaccggtgatgttgggttggatggcgcagatattggcaaaattgttatt
catccaatgcatgcttatgttgcagtgcgaagaagtgtcgcaaatcaagcttggaaaaaa
ttgcagcaaggtaaaattaaagggaagaacgtcaaagctaggttattcaaataa
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