Providencia heimbachae: NCTC12003_02212
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Entry
NCTC12003_02212 CDS
T05509
Symbol
kdsA_1
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
phei
Providencia heimbachae
Pathway
phei00541
Biosynthesis of various nucleotide sugars
phei01100
Metabolic pathways
phei01250
Biosynthesis of nucleotide sugars
Module
phei_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NCTC12003_02212 (kdsA_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
phei01005
]
NCTC12003_02212 (kdsA_1)
Enzymes [BR:
phei01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
NCTC12003_02212 (kdsA_1)
Lipopolysaccharide biosynthesis proteins [BR:
phei01005
]
Lipid A
NCTC12003_02212 (kdsA_1)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
SQH13491
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Position
1:complement(2470447..2471301)
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AA seq
284 aa
AA seq
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MQQKVVSISDINVANNLPFVLFGGMNVLESRDMAMKVCEHYVTVTQKLGIPYVFKASFDK
ANRSSINSYRGPGLEEGLKIFQELKNTFGVKIITDVHEASQAQPVSEVVDVIQLPAFLAR
QTDLVAAMAKTDAVINIKKPQFISPGQIGNIVEKFIEGGNDKIILCDRGANFGYDNLVVD
MLGFNVMMQASKGCPVIFDVTHSLQCRDPFGAASGGRRAQVAELARAGMAVGLAGLFLEA
HPDPENARCDGPSALPLDKLEPFLQQVKAIDDLVKNFPELDTSR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagaaagtagtcagtatcagtgatattaatgtcgcgaataatttgccgtttgtt
ttatttggtggaatgaacgttcttgaatctcgtgatatggcaatgaaagtgtgtgagcac
tatgtcactgtgacgcaaaaattgggcattccttatgtatttaaagcctcatttgataaa
gctaaccgttcatcaatcaattcttaccgtggtccgggactggaagaagggctgaaaatt
tttcaagaattaaaaaatacttttggtgtaaaaattatcactgatgtgcatgaagcttct
caagctcagccggtatctgaagttgtcgatgttattcaattacctgcatttttagctcgt
caaacggatttagtcgccgcaatggctaaaacagatgcggtgattaatatcaaaaaacct
caatttatcagcccaggtcaaatcggtaatatcgttgagaagtttatcgaaggcggtaat
gataaaattattctatgtgatcgtggcgcaaactttggttatgacaacttagtcgttgat
atgcttggttttaatgtcatgatgcaagcctctaaaggctgcccagtaatttttgatgta
acgcattcactgcaatgccgcgacccatttggcgcagcatctggcggtcgccgtgcacag
gttgccgagctagcaagagcgggcatggctgtcggtttagcgggtctattcctcgaggcg
catccggatccggaaaatgcacgatgcgatggcccatcagccttacctcttgataagctt
gagccattcctgcaacaagtcaaagcgattgatgacttagtgaaaaatttccctgagtta
gatactagccgttaa
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