Providencia heimbachae: NCTC12003_02895
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Entry
NCTC12003_02895 CDS
T05509
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
phei
Providencia heimbachae
Pathway
phei03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC12003_02895 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phei03400
]
NCTC12003_02895 (uvrB)
DNA repair and recombination proteins [BR:
phei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC12003_02895 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC12003_02895 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
SBDS_domain_II
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
SQH14149
LinkDB
All DBs
Position
1:complement(3169901..3171916)
Genome browser
AA seq
671 aa
AA seq
DB search
MSKSFKLYSDFQPAGDQPEAISKLCEGLEDGLAHQTLLGVTGSGKTFTIANVIAKENRPT
MLMAHNKTLAAQLYSEMKGFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPNSYLKMMLHLSDGMIIDQRSILRRLADLQ
YSRNDQAFTRGTFRVRGEVIDIFPAESDEYALRIELFDEEVERLSLFDPLTGQIQHRVPR
FTVYPKTHYVTPRERILEAMEHIKVELVERRKVLLENHKLVEEQRVAQRTQFDLEMMNEL
GYCSGIENYSRYLSGRAPGEPPPTLFDYLPSDGLLVVDESHATIPQIGAMYKGDRSRKET
LVEYGFRLPSALDNRPMRFEEFEALAPQTIYVSATPGNYELDKSGNEVIEQVVRPTGLLD
PIIEVRPVKTQVDDLLSEIRIRVEKNERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
ETVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGRAILYGDRITKSMAKAIAETERRRAKQIEFNEQHGIIPQGLNKKVGDILQIG
HKVGGKGKRSKDSIKQDVIADAQSMTTKELEKRISQLEAQMYKHAQDLEFEAAARLRDDL
QTLRNQFIANS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagagttttaagctgtattctgattttcagccggcaggcgatcagcctgaagca
atcagtaagttgtgtgaagggctagaagatggacttgctcatcaaacgttattgggggta
acgggttcaggtaaaacctttactatcgccaatgtgattgcaaaagaaaaccgaccgacc
atgctaatggcgcataacaaaacattggcggctcagctctatagcgaaatgaaaggtttc
tttcccgataatgcggttgaatactttgtttcttactatgactactatcagcctgaagct
tatgtcccgagctctgatacctttatcgaaaaagacgcctctgtaaacgaacacatagaa
caaatgcgcttatctgcgaccaaggccctacttgaacgtcgtgacgtgattgtggtggct
tctgtctcggctatttacggtttgggcgaccctaatagctatttaaaaatgatgttgcat
ttatcggacggtatgatcattgatcagcgttccattttaagacggctagccgatctgcaa
tatagccgaaacgatcaggcctttacgcgaggtacattccgagttcgtggtgaagtgatc
gacattttccctgcggagtctgatgaatatgccttacgcatcgagttatttgatgaagaa
gtcgaaagactttcactatttgacccgctgacagggcaaattcagcatcgcgttccacgc
tttacggtttaccctaaaacgcactatgtaacaccgagagaacgtattcttgaggcgatg
gaacatatcaaggttgagcttgttgaacggcgcaaagtgttactcgaaaaccataaatta
gtggaagagcaaagagttgctcagcgtactcagtttgatttagaaatgatgaatgagctc
ggttattgttcaggcattgaaaactattcacgctacctatcggggcgggctccgggcgag
ccaccaccaacattatttgattacttgccttctgatggcttgctggtggttgatgaatct
catgcaactattccgcaaattggcgcgatgtataaaggcgaccggtcacgcaaagagaca
ctggttgagtatggttttcgtttaccctcagcccttgataaccggccaatgcgttttgag
gaatttgaagccctagcaccccaaacgatttacgtgtcagcaacccctggaaattacgag
cttgataaatcaggtaatgaagtcattgaacaagtggttcgaccgaccggcttactcgat
cccattatcgaagtacgtccagttaagacacaagttgatgatttattatctgaaataaga
attcgagtcgaaaaaaatgagcgggtgttagtcaccacgttaaccaaacgcatggcggaa
gatttaaccgaatatcttgaagagcatggggaacgtgttcgttatcttcactctgatatt
gaaacggttgaacgtgttgaaattattcgtgatttacgtcttggtgagtttgatgttctc
gttggaattaacttgttaagagaagggctcgacatgcctgaagtttctctggttgcgatc
cttgatgcagataaagaaggcttcctgcgttctgagcgttcgcttattcagacaataggg
cgtgcagcgcgaaatctgaatggtagagcgatcctgtatggggatcggatcaccaaatca
atggcgaaagccattgccgaaacggaacgtcgccgggctaagcagatcgaatttaacgaa
cagcatgggatcatacctcaaggcttaaataagaaagtgggtgatatcctccaaattggc
cataaggtcggtggtaaaggtaaacgcagcaaagatagcatcaaacaggatgtgatcgcg
gatgcacaatcaatgacaacaaaagagttggaaaagcgcatttcacagcttgaagcgcag
atgtataagcatgcacaagatcttgaatttgaggcggctgctcgattgagggatgaccta
caaacattgagaaatcaatttattgctaactcttaa
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integrated database retrieval system
