Providencia heimbachae: NCTC12003_03102
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Entry
NCTC12003_03102 CDS
T05509
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein rapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
phei
Providencia heimbachae
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phei03021
]
NCTC12003_03102 (rapA)
Transcription machinery [BR:
phei03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NCTC12003_03102 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
Flavi_DEAD
COG2_N
Motif
Other DBs
NCBI-ProteinID:
SQH14441
LinkDB
All DBs
Position
1:3388484..3391390
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGAVVAIDVRMVTLLFPASGENRLYSRSDAPITRVMFNEGDT
ITSHEGWQLRIERIEEDKGLLTYIGTRLDTEETEVSLREVFLDSKLTFNKPQDRLFAGQI
DRMDRFALRFRARKFYSEQVKHQSTGLRGIRASLIPHQLHIANEVGKRHHPRVLLADEVG
LGKTIEAGMIIHQQLMAGRAERVLIIVPDSLQHQWLVEMLRRFNLRFSLFDDSRYSEAQH
DSDNPFETEQLVLCSLDFVRRNKQRFDQLVEAGWDMMVVDEAHHLQWSEAAPSREYQVIE
TLAEHVPSILLLTATPEQLGQESHFARLRLLDPSRFHDYQEFIAEQENYRPVADAVSLLL
SGVKLTREQQNLLNELIKEQDIEPLLKAANLEGEDSIAARQELTNMLMDRHGTSRLLFRN
TRNGVKGFPCRELHSLKMPLPTQYQTAIKVAGIMGSKKDVETRAKEMLYPEQIYQEFEGE
NATWWNFDPRVEWLMGFLTANRHEKVLVICAKAATALQLEQVLREREAIRAAVFHEGLSL
LERDRAAAYFASQEEGAQVLLCSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRI
GQTRDITIHIPYLESTAQSVLLRWYHEGLDAFEHTCPTGRAIYDKYYQPLLQYMAEPTVT
DGFDDFIKACREEHDTLKLQLEQGRDRLLEMHSNGGESGNKLAEEIGAGDNDTELVNFAL
NLFDIVGINQEDKSDNLIILTPSDHMLVPDFPGLPQDGCTITFDREQALSREDTQFISWE
HPIIRNGLDLVLSGDTGSCAVSLLKNKALPVGTLLTELIYVVEAQAPKHLQISRFLPATP
VRLLVDLKGNNLSSQVEFESFNRQLNAINRHMASKLVNAVQNEVHSVLRLSEPMMEKEAQ
TIIESAKEAADKALTLELSRLEALKAVNPNIRDEELDIIEEERQQLMTNIDQATWRLDAI
RLVVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccatttactcttggtcaacgctggatcagcgatacagaaagcgaacttggattaggc
gccgttgtggctattgatgtccgcatggtgactttgcttttccctgcaagcggagaaaac
agactctactcacgcagtgatgcaccaattacccgagtcatgttcaatgaaggtgacacc
atcaccagccatgaaggctggcaactgcggatcgagcgcattgaagaagataaaggctta
ctcacttatattggtactcggttagataccgaagaaaccgaagtaagtctgagagaagtt
tttctcgacagtaagctgaccttcaataaaccacaagaccgcttgtttgccggtcaaatt
gatcgaatggatcgcttcgcattacgttttcgtgcgcgaaaattctacagtgaacaagtg
aagcaccaatcaactggtttacgtggcatacgagcaagtcttatccctcatcaactgcat
atcgccaatgaagtcggtaaacgtcaccatcctcgcgtattacttgcggatgaagtcggc
ctcggaaaaacaatcgaagctggcatgattatccaccaacaattaatggcaggtcgtgct
gagcgtgttttaatcattgttcctgatagccttcagcaccaatggttggtcgaaatgtta
cgccgctttaacctgcgcttttcattatttgatgacagccgttatagcgaagcgcaacat
gatagcgataacccgtttgaaacagagcaattggttttatgttccctcgattttgttcgc
cgtaacaaacaacgctttgaccaattagtcgaagcgggttgggatatgatggttgtcgat
gaagctcaccatttacagtggagcgaagctgcccccagccgcgaatatcaagtcattgaa
acactagcagaacatgttccatctattctgttactaaccgcgacgccagaacaactcggt
caagagagccactttgctcgcttacgcttactcgatccaagtcgctttcatgattatcaa
gaatttattgctgagcaagaaaactatcgccctgttgcggatgcagtctctctgctgctt
tctggcgtgaaattaacgcgtgaacagcaaaacttgctgaatgaattgatcaaagagcaa
gatattgaacccttattgaaagcggcaaatcttgaaggtgaagatagtattgcggcgcgc
caagagcttaccaatatgttgatggacaggcatggtacaagccgtctgttatttagaaac
acacgtaatggtgtcaaaggtttcccttgccgtgaactgcattcattaaaaatgccactg
ccgacccaatatcaaacagcaatcaaagtagctggcattatgggttcgaaaaaggatgtt
gaaacccgcgcaaaagagatgctttacccagagcaaatttaccaagagtttgaaggtgaa
aatgccacttggtggaactttgatcctcgtgttgaatggttaatgggcttcctgacagct
aatcgacatgaaaaagtgttagtgatttgcgcaaaagcagcaaccgctttgcaactcgag
caagttttacgtgaacgtgaagccatccgcgctgccgtattccatgaaggactatcccta
ttagaacgcgaccgtgctgcagcttactttgcttctcaagaagaaggagcccaagtatta
ctgtgttcagaaattggttctgaaggccgaaatttccagtttgcaaatcagttagtgatg
tttgacttgcctttcaacccagacttacttgagcagcgcatcggtcgtttagaccgcatc
ggacaaacccgcgatatcactatccatatcccttatttggaaagtacggctcaatcagtc
ttattgcgttggtatcatgaaggcttagatgctttcgagcacacttgcccaaccggccgt
gctatttatgataaatattaccagccgctattacagtatatggccgagccaaccgtcact
gatgggtttgatgattttattaaggcttgccgtgaagagcacgacacactgaaattgcaa
cttgagcaagggcgtgaccgcctacttgaaatgcattcaaatggtggtgaatcaggcaat
aaattggccgaagaaattggtgcgggtgataacgatactgaattagttaattttgccctt
aatctgtttgatattgttggcatcaatcaggaagataaaagtgacaatttaattatttta
acgccatctgatcatatgctagttcctgatttccctgggcttccgcaagatggttgcacg
atcacattcgatcgtgaacaagcgctttcccgagaagacacccagtttattagctgggag
cacccgattatccgtaatgggctcgatttggttctatcgggagatacaggaagttgtgct
gtttcattattgaaaaataaagcattacctgttggcacattactgacagagttaatttat
gtggttgaagcgcaagcgcccaaacacttacaaattagccgcttcttgccagcaactccg
gtgcgcctactcgttgacctaaaaggcaacaacctatcctctcaggttgaatttgaaagc
tttaaccgccagctcaatgcgatcaaccgccatatggcaagcaagttagtcaatgcggtt
caaaatgaggtgcattctgttttacgcctctccgagcctatgatggaaaaagaagcccaa
actatcattgagagtgcgaaggaagctgccgacaaagcgttaacgttagagctttctcga
ttagaagctctcaaagcggtcaacccaaatatccgtgatgaagagctagacattatcgaa
gaagaacgccaacagttgatgacgaatatcgaccaagccacatggcgacttgatgccatc
cgcttagtcgtagtaacgcatcagtaa
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