Providencia heimbachae: NCTC12003_03615
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Entry
NCTC12003_03615 CDS
T05509
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
phei
Providencia heimbachae
Pathway
phei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12003_03615 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phei03019
]
NCTC12003_03615 (pnp)
03016 Transfer RNA biogenesis [BR:
phei03016
]
NCTC12003_03615 (pnp)
Enzymes [BR:
phei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCTC12003_03615 (pnp)
Messenger RNA biogenesis [BR:
phei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC12003_03615 (pnp)
Transfer RNA biogenesis [BR:
phei03016
]
Prokaryotic type
tRNA degradation factors
NCTC12003_03615 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
OB_RRP5_4th
S1_2
aRib
S1_RRP5
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
SQH15343
LinkDB
All DBs
Position
1:complement(3932933..3935053)
Genome browser
AA seq
706 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTIETGMMARQATAAVMVNMDDTAVFVTAVAQKKVKEGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPGEGETLIARLIDRPLRPLFPETFLNEIQIIATVVSV
NPQVNPDMVAMIGASAALALSGVPFNGPIGAARVGFINDQYVLNPTADELKTSRLDLVVA
GTDNAVLMVESEAELLSEEQMLGAVVFGHEQQQIVIKEINELVKVAGKEKWDWQPEPVNQ
ALQDRVAALAESRMGDAYLITEKQERYAQVNLLKDEVIATLVAEDETVDTSEISDILANL
EKQVVRSRVIRGEPRIDGREKDMVRALDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQVIDQIMGEYTDRFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPNHAD
FPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGNDFVVLSD
ILGDEDHLGDMDFKVAGSREGISALQMDIKIEGITSEIMKVALNQAKGARLHILGTMEQA
ITGPREEISEFAPRIYTIRISPDKIKDVIGKGGSVIRALTDETGTTIEIEDDGTVKIAAT
DGLKAKEAIRRIEEITAEVEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEIDRQGRVRLSMKEAVATEEAPAQQDSAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaatcctattgttcgcaaatttcaatacggtcaacataccgtaacgattgaaacc
ggcatgatggctcgtcaggcaactgcagctgtgatggttaacatggatgatactgcggta
ttcgttactgcggttgctcagaaaaaagttaaagaaggccaaagcttctttcctttaact
gttaactaccaagaacgtacttatgcagcaggccgtattccaggtagcttcttccgtcgt
gaaggccgcccaggtgaaggtgagacactgattgctcgtctgattgaccgtccattacgt
ccactgtttcctgaaacttttttgaatgaaattcaaatcattgccaccgtcgtttctgtt
aacccacaagttaacccagacatggttgcgatgattggtgcttcagcagcactagcacta
tcaggtgttccatttaatggccctatcggtgcagcacgtgttggtttcatcaatgaccaa
tatgttctgaacccaacagctgatgagttaaaaactagccgtcttgaccttgtggttgcg
ggtactgacaacgcagtattaatggttgaatctgaagctgagttattaagcgaagaacaa
atgttaggcgccgttgtttttggtcatgagcaacaacaaattgtgatcaaagaaattaac
gaactagtaaaagtagccggtaaagagaaatgggattggcagccagagccagttaaccaa
gctctgcaagaccgtgtagcagcactagcagaaagccgtatgggcgatgcttatctcatc
actgagaaacaagagcgttatgcacaagttaacttgctcaaagatgaagtgattgcaaca
ctggtagctgaagatgaaaccgttgatacttctgaaatttctgacattcttgctaactta
gaaaaacaagttgttcgtagccgtgttatccgtggtgagccacgtattgatggtcgtgag
aaagatatggttcgtgcacttgatgtacgtactggcgttcttccacgcactcacggttct
gcgctcttcacccgtggtgaaactcaagcactggttactgcaacattaggtactgagcgt
gacgcacaagttatcgaccaaataatgggcgaatatactgaccgtttcttgttccattac
aacttccctccatattctgttggtgagactggtatggtcggttcgcctaaacgtcgtgaa
attggtcacggtcgtctagcaaaacgtggtgtattggctgttatgcctaaccatgcagac
ttcccatatactatccgtgttgtttctgaaattacagaatctaacggttcatcatcaatg
gcgtctgtttgtggtgcgtcactggctctgatggatgctggtgtaccaattaaagccgct
gttgctggtattgcgatgggtctggttaaagaaggtaatgattttgttgttctatccgat
atcttaggtgatgaagaccacttaggtgatatggactttaaagttgctggtagccgtgaa
ggtatcagtgcactgcaaatggacattaaaatcgaaggtattactagcgaaatcatgaag
gttgctctgaaccaagctaaaggtgcgcgtttacacatccttggtacaatggaacaagca
atcacgggtccacgtgaagaaatctctgaatttgcaccacgtatctatacaatccgtatt
agcccagacaaaattaaagatgtcatcggtaaaggtggttcagttatccgtgcactaacg
gatgaaacgggcaccacgattgaaatcgaagatgatggtacggttaaaattgctgcaact
gatggcttgaaagcgaaagaagcgattcgtcgtatcgaagagattacggcagaagttgaa
gttggccgtatttaccaaggtaaagtaacgcgtatcgtagactttggtgctttcgttgca
atcggtggcggtaaagaaggtctggtccatatttctcaaatcgctgataagcgtgtagaa
aaagtaacggattacctgcaaatgggtcaagaagttcctgttaaggttctggaaatcgat
cgtcaaggtcgcgtccgccttagcatgaaagaagctgttgcaacggaagaagcaccagca
cagcaagactcagcagagtaa
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