Providencia heimbachae: NCTC12003_03688
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Entry
NCTC12003_03688 CDS
T05509
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
phei
Providencia heimbachae
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NCTC12003_03688 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phei03019
]
NCTC12003_03688 (orn)
03009 Ribosome biogenesis [BR:
phei03009
]
NCTC12003_03688 (orn)
Messenger RNA biogenesis [BR:
phei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC12003_03688 (orn)
Ribosome biogenesis [BR:
phei03009
]
Eukaryotic type
Pre-60S particles
RNases
NCTC12003_03688 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
SQH15478
LinkDB
All DBs
Position
1:complement(4003606..4004148)
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AA seq
180 aa
AA seq
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MQKNENNLIWIDLEMTGLDPIRDRIIEIATIVTDSNLNILAEGPVIAVHQSEEQLALMDD
WNVNTHTGSGLVERIRKSVISEREAELATIAFLEKWVPKGASPICGNSVGQDRRFLFNYM
PELESYFHYRYLDVSTLKELARRWKPEILTGFSKKNTHQALDDIRESVAELAYYRETFIK
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaatgagaataatttaatctggattgatttagagatgacgggcctcgatcca
atccgtgatcgtattattgaaattgccaccattgtaacagacagtaaccttaatatttta
gccgaagggccggtgattgccgttcatcaatccgaagagcaactggcattgatggatgat
tggaatgtgaatacgcacacgggaagcggccttgtcgaacgcattcgaaaaagtgtgatt
agtgagcgtgaagccgagcttgcaactatagcatttttagaaaaatgggtaccaaaaggg
gcgtcacccatttgtggaaacagtgttggtcaagatcgccgttttttattcaactatatg
cctgagctcgaaagctattttcactatcgttacctcgatgtcagcacactcaaagaactc
gctcgccgttggaaacccgaaattctaacgggtttctcaaagaaaaatacgcatcaagcg
ctagatgatattcgagagtctgttgctgaactcgcttattatcgtgagacgtttattaaa
taa
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