Providencia heimbachae: NCTC12003_03742
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Entry
NCTC12003_03742 CDS
T05509
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase rhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
phei
Providencia heimbachae
Pathway
phei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12003_03742 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phei03019
]
NCTC12003_03742 (rhlB)
Enzymes [BR:
phei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC12003_03742 (rhlB)
Messenger RNA biogenesis [BR:
phei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC12003_03742 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
SQH15577
LinkDB
All DBs
Position
1:4059554..4060840
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AA seq
428 aa
AA seq
DB search
MSKAHLTEKKFSDFALHPKVIEALNKKGFDYCTPIQAFTLPFTVEGKDVAGQAQTGTGKT
LAFLTSTFHYLLTHPAAEGKKTNQPRALIMAPTRELAVQIYSDAKELAEYTGLKMGLAYG
GDGYDEQLKVLQNGVDILIGTTGRLIDYAKQNYVDLSAIQVIVLDEADRMYDLGFIKDIR
WLFRRIPAATERLNLLFSATLSYRVKELAFEQMNNPEYVEVEPLQKTGHRIKEELFYPSN
EEKMRLLQTLLEEEWPERCIIFANTKHRCEDVWAHLAADGHRVGLLTGDVAQKKRLRILE
QFTQGQIDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGESGNSISLA
CEEYALNVPGIEEYIQHSIPVSKYNSDALLTELPVPKRRHRPRPSGPRRNSNSPRRHNGP
RNNHKRPG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcacacttgacagaaaagaagttttccgacttcgcattgcaccctaaagtc
attgaagctcttaataaaaaaggcttcgattattgcacgccgattcaggcgttcaccttg
ccttttactgtcgaaggcaaagacgttgcgggacaagcgcaaaccggtacaggtaaaacg
ttagcatttttaacgtctacatttcattatctattaactcaccctgctgctgaggggaaa
aaaaccaatcagccccgtgcattgatcatggcgccgactcgtgaattagccgtacaaatt
tactcggatgcaaaagaacttgctgagtatactggcctgaaaatgggtttggcttacggc
ggtgatggttatgatgaacagctaaaagttcttcaaaatggtgttgatattttgattggc
acaaccggtcgtcttatcgactatgctaaacaaaactacgtcgatttaagtgcaatccaa
gtgattgttctcgatgaagctgatcgcatgtatgaccttggctttattaaagatattcgt
tggctattccgccgtattccggccgcaacagaaaggcttaacctactgttctctgccaca
ctgtcttatcgtgtgaaagaattagcgtttgagcaaatgaataaccctgaatatgttgaa
gtagaaccgctacaaaaaacaggccatcgtataaaagaagagctattttacccttcaaac
gaagaaaaaatgcgcctactacagaccttacttgaagaagaatggcctgagcgctgtatt
atttttgcaaatacaaaacaccgttgtgaagatgtctgggctcacctcgccgcagatggt
caccgtgttggcttgctgacaggtgatgttgcacagaaaaaacgcctacgtattttagag
caatttacccaaggccaaattgatattttagttgccactgatgttgctgcacgtggttta
cacattccatctgtaactcatgtatttaactatgacctacctgatgactgtgaagactat
gtacaccgtattggtcgaacaggtcgtgctggtgaaagtggtaactcaatcagcttagcg
tgtgaagaatacgctctgaatgtacccggtatcgaagagtatattcagcactcaatccct
gtgagtaaatacaatagtgatgctctgttaactgagcttccagtaccaaaacgtcgccat
cgtccgcgtcctagtggacctagacgtaactcaaattcgccacgtcgccacaatggcccg
cgtaacaaccataaacgaccaggctga
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