Providencia heimbachae: NCTC12003_03775
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Entry
NCTC12003_03775 CDS
T05509
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
phei
Providencia heimbachae
Pathway
phei03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC12003_03775 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phei03021
]
NCTC12003_03775 (rpoA)
03400 DNA repair and recombination proteins [BR:
phei03400
]
NCTC12003_03775 (rpoA)
Enzymes [BR:
phei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC12003_03775 (rpoA)
Transcription machinery [BR:
phei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC12003_03775 (rpoA)
DNA repair and recombination proteins [BR:
phei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC12003_03775 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
SQH15631
LinkDB
All DBs
Position
1:complement(4093941..4094930)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVKVQGKDEVILTLNKSGIGPVTAADIIHDGD
VEIVKPQHIICHLTDESASINMRIKVQRGRGYVPASARVHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EIKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADD
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgctaaggtgacccttgagcctttagagcgtggctttggccatactcttggt
aacgcactgcgccgtattctgctttcgtctatgccgggttgtgcggtgacagaggttgag
attgatggtgtactgcatgagtacagcactaaagaaggtgtacaggaagatatcctggag
attctcctcaacctgaaagggctggcggtaaaagttcaggggaaagatgaagttatttta
accttgaataaatctggcattggccctgtgactgcagccgatatcatccatgatggagat
gtcgaaatcgtcaagccacagcacattatctgccaccttactgacgaaagtgcgtctatt
aatatgcgcatcaaagttcagcgtggtcgtggttatgtgccggcttctgcccgagtacat
tcggaagaagatgagcgcccaatcggtcgtttattagtcgatgcttgctacagccctgta
gagcgtattgcctacaatgttgaagcagctcgtgttgaacaacgtactgacttggataag
ttagttatcgaaatggaaactaacggtacaatcgatcctgaagaggcgattcgccgtgca
gcgaccattctggctgaacaacttgaagcttttgttgatttacgtgatgtacgtcaacca
gaaattaaagaagaaaaaccagaattcgatcctatcttactgcgcccagttgacgatctg
gaattgactgtccgctctgctaactgcctcaaagcagaagctatccactacatcggtgat
ctcgtacagcgtacagaagttgagttgcttaaaacacctaacctcggtaagaaatctctt
actgaaattaaggatgtcttggcatctcgcggtttgtctctgggcatgcgcttagaaaat
tggccgccagctagtattgctgacgattaa
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integrated database retrieval system
