Providencia heimbachae: NCTC12003_03843
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Entry
NCTC12003_03843 CDS
T05509
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
phei
Providencia heimbachae
Pathway
phei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC12003_03843 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phei03400
]
NCTC12003_03843 (priA)
Enzymes [BR:
phei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC12003_03843 (priA)
DNA repair and recombination proteins [BR:
phei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC12003_03843 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHD_PriA
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
TrwB_AAD_bind
Phage_tail_terminator_3
Motif
Other DBs
NCBI-ProteinID:
SQH15749
LinkDB
All DBs
Position
1:4150921..4153119
Genome browser
AA seq
732 aa
AA seq
DB search
MIVVQVALPVPLNRTFDYRLPENMPLPVIGSRVMVPFGKRQALGVVVNHSDKSEFSEDQL
KSIEQVLDSQTLFPDDLWQLLLWSSQYYHYPLGEVLFHAMPTLLRQGKAAEFTPIWQWQV
TPEGLSVDINELKRSPKQQQALALLRRHPIYRHQISELEISESALQALKKKMYAELHPIQ
PITEKWQPTFTVCGERLRLNSEQATAVGAIRAQDDQFSPWLLAGITGSGKTEIYLSVLEN
VLAQGKQALVLVPEIGLTPQTINRFRERFNAPVDVLHSGLNDSERLAVWLRAKQGANAII
IGTRSALFTPFARLGIIIIDEEHDSSYKQQDGWRYHARDLAVFRAKKENIPIVMGTATPS
LETLCNVQQGKYRQLELTIRAGNARPATQHLIDLKGQPLKHGLSHLLINHIKEHLAKNNQ
VILFLNRRGYSPALICHECGWIAECQRCDHYYTLHQNFRQLRCHHCDSQRPVPHQCPQCG
SSNLVPVGMGTEQLEEGISELFPDTPVTRIDRDTTSRKGELEQHLNEIHAGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSSDFRAAERFAQLYVQVSGRAGRAGKQGEVFLQTHH
PEHPLLLTLLESGYNAFSQEAMEERRIAMLPPYTSHILIRSEDHNNHDSRQFLQNVRQYV
SQHPQSDARLWILGPMPSIQAKRGGRFRWQLLLQHPSRAYLQQFTAQLLPELLKQPESRK
VKWNIDVDPTDG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgttcaggtggctttacctgtccctttaaatcgcacatttgattatcgctta
cccgaaaatatgccactacccgtgattggtagccgcgtaatggtgccctttggtaaacgc
caagcccttggagtggtggtaaatcatagcgataaaagtgaattttcagaggatcaatta
aaatccatcgaacaagtgctcgactcacaaacgctattccctgatgacctgtggcaacta
ttgctctggtcatcccaatactatcactacccccttggtgaagtgttatttcatgcgatg
ccaacattacttcgccaaggtaaagccgctgaattcacgccaatttggcaatggcaagtc
acacccgaggggttatctgttgatattaatgaacttaaacgttcgccaaaacaacaacaa
gccctcgcgttactacgtcgtcatcctatttatcgccatcaaattagtgaattggaaatc
agtgaaagcgcactacaagcattaaagaaaaaaatgtacgcagaactacatccaatccaa
ccaataaccgaaaaatggcaacctacgtttacggtttgtggtgaacgcctgcgtttaaac
agcgagcaagcgactgctgttggggctatccgagcacaagatgaccaattttcaccttgg
ttactcgcagggatcacaggctccggaaaaacagaaatctatctcagtgtattagaaaat
gtacttgctcaaggaaaacaagcccttgttttagtgcctgagattggcttaacgccacaa
acaattaaccgttttcgtgagcggtttaatgccccggtggatgtactgcactcaggactc
aatgatagcgaacgcctcgcagtttggttacgtgctaaacaaggcgctaacgcgattatc
attggtacccgttctgcactcttcacgccatttgcacgcttaggcattattattatcgat
gaagagcatgatagctcttacaagcaacaagatggctggcgctatcacgcgcgtgacctc
gccgtttttcgcgcgaaaaaagaaaacattccgattgttatggggacagcaacaccgtct
ttagagactctgtgtaacgtacaacagggcaaatatcgccaattagagctgactatccga
gcgggtaatgcacgccctgcaacacagcatttgattgatttaaaaggacaaccgcttaag
catggtttatctcacctgcttatcaatcatattaaagaacatttggcaaaaaataaccaa
gttatcttgtttttaaatcgccgtggctattctcccgccttaatttgtcatgaatgtgga
tggattgcagaatgccaacgttgcgaccactattacacccttcaccaaaactttcgccaa
ctacgctgccatcactgtgatagccagcgccctgttccgcaccaatgtccacaatgtggc
tcaagcaaccttgtcccggttgggatgggaacagaacagctcgaagaaggcatctctgaa
ttatttcctgatacacctgtaacccgtattgaccgtgataccaccagccgaaaaggggag
cttgaacaacatttaaatgaaatccatgctggcggtgcgcgtatcttaattggtacgcaa
atgctagccaaagggcatcactttcctgatgtgactttggtggcattgttagatgtcgat
ggggcgctattttcgagtgatttcagggcagcagaacgttttgctcaactttatgttcaa
gtttcaggccgtgctgggcgagcaggtaaacagggagaggtatttctacaaactcatcat
cccgagcaccctttgttgctcaccttattagaaagtggttacaacgcgttttcccaagaa
gcaatggaagaacgacgcattgccatgctgcccccatacaccagccatattttaattcgt
tcggaagaccataataatcacgattcacggcagtttttacaaaacgtaaggcagtatgtg
tcccaacatccccaaagcgatgcacggctatggatcttaggtccaatgccatctattcaa
gctaaacgcggtggacgctttcgctggcagctattactacagcacccttcccgtgcctat
cttcaacaatttacagctcaacttttacctgagttactcaagcagcctgaaagtcgcaaa
gtaaaatggaatattgatgttgacccaactgatggttaa
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