Prevotella herbatica: prwr041_01320
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Entry
prwr041_01320 CDS
T08008
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pher
Prevotella herbatica
Brite
KEGG Orthology (KO) [BR:
pher00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
prwr041_01320
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
HHH_7
S1_RRP5
YqgF
T2SSK
Spt6_S1
HHH_6
HHH_2
ATP-synt_ab_C
Motif
Other DBs
NCBI-ProteinID:
BCS84239
UniProt:
A0ABN6EE62
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Position
172079..174193
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AA seq
704 aa
AA seq
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MTNVNDIISKNLNIPITGVSNTIMLLDDGCTIPFISRYRKERTGSLDEVQITDISVMYDK
LKELIKRKETVVKTIEEQGKLTSELSKKIDECWNANELEDIYLPYKPKRRTRAQIARENG
LEPLSVIIMMHREQSPQKVAERFVKNNIKSVEEALEGAKDIIAETISEDEQARQSVRKFF
KRDAMIVSKVVKNKSTDEQAQKFSDYFDFQEPLKRCSSHRLLAMRRGENEGILRISIDTD
EDECIDNIKRHYIHGYGKCQQLVDEAINDSFKRLIKPSIETEFANLSKELADDEAIKVFA
ENLRQLLLAAPLGQKRVMGVDPGIRTGCKVVCLDAQGELIFHDVVFAVGDKASSNALSKF
NKIVKDYNIEAIAVGNGTASRETSDILRKIENIPTYVVSEDGASIYSASKIARDEFSEYD
LTVRGAVSIGRRLMDPLAELVKLDPKSIGVGQYQHDVNQTKLKKTLDTVIESCVNTVGVN
LNTASKHLLTYVSGLGPTIAKNIVDYRKENGAFESRNQLKKVARLGTNAFEQCAGFLRIP
DAKNPLDNSAVHPESYKVVEKMAKDNNCKVKELINNKEILKSIKLSNYITDNIGLPTLQD
IMKELEKPGLDPRDQIETFEFAKDVKSVEDLIIGMELPGIVTNITNFGAFVDVGVHQDGL
VHISQLADRYIKDPNEIVKLHQQVKVKVIEIDRKRNRISLSMKL
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgactaacgtaaatgatataatatcaaagaatttgaatatccctattacaggagtttca
aatactataatgttacttgatgacggatgtacaatccctttcatttcaaggtatagaaaa
gagcgtacaggatctttggatgaagtacaaattacagatataagtgtaatgtatgataaa
ctgaaagagcttatcaaaagaaaagaaactgtagtcaaaactatcgaagagcaaggtaag
ctgacatcagaactatcaaaaaagatagatgaatgttggaatgctaatgagctggaagac
atatacttaccatataagccaaaaagaagaactagagcacaaattgcaagagaaaatggc
cttgaaccactttcggttataataatgatgcatcgtgagcaaagcccacaaaaagtggca
gaaagatttgtaaagaacaatataaaaagtgtagaagaagcactagaaggagctaaagat
attattgcagaaactataagcgaagatgaacaagcgagacaatctgtaagaaagtttttt
aaacgagatgctatgattgtctctaaagttgtaaagaacaagagcacagacgaacaagca
caaaaattttctgactacttcgattttcaagaaccattaaagcgttgcagcagtcataga
ttactagctatgagaagaggtgaaaacgaaggaatcctgcgcattagcattgacaccgac
gaagatgagtgtatagataatataaagagacactacattcatggatatggcaaatgtcaa
caacttgttgacgaagctatcaacgactcttttaaaagattgataaagccctctattgaa
acagagtttgcaaatttaagtaaggaattagccgacgatgaggccataaaagtattcgct
gagaatctgagacaattactcttggctgcgcctttaggtcaaaaacgagttatgggagtt
gaccctggcataagaacaggatgtaaggttgtatgtcttgacgctcaaggagaactaatt
tttcatgacgtagtatttgcggttggtgacaaagcaagtagcaacgctttaagcaaattc
aacaagatagtaaaagactataacatcgaagctatagctgtgggtaacggaacagcaagc
cgagagacctcagacatacttagaaaaattgaaaatataccaacttatgttgttagtgaa
gatggtgcttctatatattcggcatcaaaaattgccagagatgaattttcagaatatgac
ctaactgtacgtggagcagtttctatcggaagaagacttatggatccattggctgaactt
gtgaaactagaccccaaaagcataggagtcggacaatatcagcatgacgtaaatcaaaca
aaactaaagaaaacccttgatactgttatagaaagttgcgtaaatacagttggcgtaaat
cttaatacagcaagtaaacatctactcacatacgtgagtggactcggtcctactattgct
aaaaatattgttgactacagaaaagagaatggagcttttgaaagtagaaatcaacttaag
aaagttgctagacttggaacaaatgcctttgaacaatgcgcaggatttcttcgcatacca
gatgcaaagaatcccctagacaatagtgctgttcatcctgagagttacaaagttgttgag
aaaatggcaaaagataacaactgcaaggtaaaagaacttataaacaacaaggagatttta
aaaagcataaagctatcaaactatatcacagacaacattggacttcctactctacaggat
ataatgaaagaattggaaaaaccagggttggatccaagagaccaaattgagactttcgaa
tttgcgaaagatgtaaaatcagttgaagatttaataattggcatggaacttcctgggata
gtaaccaatattacaaatttcggtgcttttgttgatgtaggggttcatcaagacggattg
gtacatatctcccaattggcagacagatatataaaagatccaaatgaaatcgtaaaactc
catcaacaagtaaaggtcaaggttattgaaattgacagaaaaagaaacagaataagtctt
agcatgaaactataa
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