Prevotella herbatica: prwr041_03270
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Entry
prwr041_03270 CDS
T08008
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pher
Prevotella herbatica
Brite
KEGG Orthology (KO) [BR:
pher00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pher02000
]
prwr041_03270
Transporters [BR:
pher02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
prwr041_03270
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_6
TPR_19
ANAPC3
Motif
Other DBs
NCBI-ProteinID:
BCS84434
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Position
complement(424187..426187)
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AA seq
666 aa
AA seq
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MNYISNIFKGSAAFVMATMLVSCGDSFLGQDPLSFYEPSTTYSNEAGLKSALGMCDLELK
TIIMDGNGNVLPMASNYNMSDIGLYAKTDMGGGFQDNFDAKLTPTSGMNGGGDGNAMQRF
WDEGYTGVKYANTVLSYVDKAQGLDDNTRNIYKGRAYFHRALRYYYLTLQFGDIPLVTKI
ITKPKQDYKSTSKEAIFKMLVNDLEFAVKYVPSQSAMTDIGMVNKEACLQLLAKCYLVTG
QYDKAEQTATDLISNYGLHLMESPFGTFVAGNQKTWPITRNVLWDLHRGENVCDPANKEL
IMPILNFNDQNFTGYSIMRACFAHWGNGVIKDPSGISPAGKNIARNNADYDENNDWVRSI
GRGIGCFRTSKHYNQAIWNVDGTPDYQDLRHNRKVGNWVEMEDIRYSNKKSPYYGKNYQL
YATEDYVDGTGKTIVHKGDLLCGDTIRSWYPTPLYQCYILDKTAEGNLGANQFNGASTGS
NGNLYLFRLAETYLIRAEARFYQGNTTGAADDVNVVRKRANARHMFTTVTIGDILDERAR
ELYMEEWRQPEMTRVAWCLAKSGQPDEWGHTYDIKTWDKQEGTDRTGGSYWYQRLINYSL
FNNGIIQSNGISLEYKVNKHNLFWPIPNSAITANTGAALRQNYGYDGYNESTQMWTNWED
AVADEK
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaactatataagtaatatatttaaaggcagtgcggcatttgtcatggcgacaatgctc
gttagttgtggtgactcatttttgggtcaagacccactgtcattctatgagccttcaaca
acatatagcaatgaggctggattgaagtcagctcttggtatgtgtgacctagagttgaag
acaatcataatggatggaaacggaaacgttcttccaatggcttccaactataatatgtct
gatattggcttatatgccaagacagatatgggtggtggtttccaagataactttgatgca
aagctaactcctacatctggtatgaacggtggtggtgatggtaatgccatgcaacgtttt
tgggatgaaggatatacaggtgtgaaatatgctaatactgtgctatcatacgtagataaa
gcacaaggacttgatgataatacaagaaacatttataaaggacgtgcttatttccaccgt
gcattgagatattactatctgacattacagtttggtgatattccattggtaacaaagatt
atcacaaaaccaaagcaagactataagagtacatcaaaggaagctattttcaagatgctt
gtaaacgacttggagtttgctgtgaaatacgtgccttctcagtctgcaatgactgatatc
ggtatggtaaacaaagaggcatgcttgcagcttttagcaaaatgctatcttgttacagga
caatatgacaaggcagaacagactgctacagatcttataagtaactatggtctgcacttg
atggaaagtccattcggaacatttgttgccggaaaccaaaagacatggcctatcacacgt
aatgtactttgggatcttcatcgtggcgaaaatgtatgcgatcctgcaaacaaggaactc
attatgcctatattgaacttcaatgatcagaatttcacaggatatagtattatgcgtgca
tgttttgcacattggggtaacggtgtaattaaggatccttcaggaatttctccagctgga
aagaatattgcacgtaacaatgctgattatgatgaaaacaacgactgggtaagatctatc
ggacgtggtattggatgtttcagaacatcaaagcattataatcaggctatctggaacgta
gacggaactcctgactatcaagacttgcgtcacaaccgtaaggttggaaactgggtagaa
atggaagacataagatatagtaataaaaagtctccttactatggtaagaactatcagcta
tatgctactgaagactatgttgacggcactggcaagactatcgttcacaagggagatttg
ctttgtggagatacgataagaagctggtatcctacaccgctataccaatgctatatattg
gataagacagcagaaggtaacttaggtgcaaatcagtttaacggtgcatctactgggtct
aatggaaacctttatctcttccgtctagctgaaacttatttgattcgtgccgaggcacgt
ttctatcaaggaaatacaacaggtgcagctgatgacgtgaacgtagtacgtaagcgcgca
aacgcacgccatatgtttacaactgttacaataggtgatattcttgacgaacgagctcgt
gaactttatatggaagagtggagacagccagaaatgacacgtgtagcttggtgtcttgca
aagagtggacagccagatgaatggggacacacttatgacataaagacatgggacaagcaa
gagggtacagatcgcactggtggaagctattggtatcagcgtcttattaactacagtcta
tttaataatggcatcatacagtcaaacggtataagtttggaatataaggttaacaagcac
aatctattctggcctattcctaattctgcaataacagctaatacgggtgctgcattgagg
cagaactatggatatgacggatataatgaatctacacaaatgtggactaattgggaagat
gctgtcgctgatgaaaaatag
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