Prevotella herbatica: prwr041_04880
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Entry
prwr041_04880 CDS
T08008
Name
(GenBank) DNA-directed RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pher
Prevotella herbatica
Pathway
pher02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pher00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
prwr041_04880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pher03021
]
prwr041_04880
Transcription machinery [BR:
pher03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
prwr041_04880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
GerE
DUF2774
HTH_40
HTH_10
Sigma70_ECF
HTH_5
zf-C2HCIx2C
HTH_11
HTH_24
HTH_29
Motif
Other DBs
NCBI-ProteinID:
BCS84595
UniProt:
A0ABN6EFD1
LinkDB
All DBs
Position
664138..664626
Genome browser
AA seq
162 aa
AA seq
DB search
MNIETIFKKLYKPLCLYALHYLGNDLNSAEDIVEDCFVKLWEHEPRNQEAYLYTAVRNAC
IDFLRKSTFVTDIEPSDLENIISDDEAKLRSEKEARLWTAIDNLPDKCRKIFLMSKRDGM
KYREIAEELCISEKTVEHQISKALKRLHGSRDEILFVMFTIF
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgaaaccatatttaaaaaattatataaaccactatgcctttatgctttgcac
tatttaggcaatgacctgaatagcgcagaagacattgtggaagactgttttgtgaaattg
tgggaacacgaacccagaaaccaagaagcgtatctttatactgccgtgcgcaacgcatgt
attgactttttacgtaaatcgacttttgttacagacatagaaccatctgatttagaaaac
ataatcagtgatgatgaagctaaattacgatcagaaaaagaagcaaggttgtggactgca
atagataacttgccagataaatgcagaaagatttttcttatgagcaaacgtgacggcatg
aaataccgtgagattgccgaagagttatgtatctcagaaaagactgtagagcaccagata
agcaaggcgctgaaacgtcttcatggcagtcgtgatgaaatattatttgttatgtttact
atattctaa
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