Prevotella herbatica: prwr041_08970
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Entry
prwr041_08970 CDS
T08008
Name
(GenBank) RNA pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
pher
Prevotella herbatica
Brite
KEGG Orthology (KO) [BR:
pher00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pher03009
]
prwr041_08970
03016 Transfer RNA biogenesis [BR:
pher03016
]
prwr041_08970
Enzymes [BR:
pher01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
prwr041_08970
5.4.99.29 23S rRNA pseudouridine746 synthase
prwr041_08970
Ribosome biogenesis [BR:
pher03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
prwr041_08970
Transfer RNA biogenesis [BR:
pher03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
prwr041_08970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
APG6_N
GIDA
Motif
Other DBs
NCBI-ProteinID:
BCS85004
UniProt:
A0ABN6EI26
LinkDB
All DBs
Position
1222040..1223629
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AA seq
529 aa
AA seq
DB search
MFHKFTNYPDTLPVRFNNPFYYEPDQLCLKAVDEVKNWIENADATFLSEIEQGKMFGVLI
VENKKELGFIAGYSGQICGRSDWKGYVPAVFDYLQPNGYFKLHEAEISSINKEIISYENS
VEKRNAVEELQSTCNEAKLETEKYKEYIKEVKSERPENKPLTQEMIHQSQFMKAELHRIK
KRYSSLIAEKQAVVDNINKEINTLKQQRRQKSDYLQRWLFKQFMMLNANGEQKDLIDIFY
NYNELHTIPPAGSGECCEPKMLQYAFSHNMRPISMAMFWWGKSPKEEIRHHLHFYPACNN
KCKPILKWMLQGIDVEPNALDREDSRTLEIIYEDEDIAIVNKPAGMLSVPGKSNRQSVYS
IMRSRYKDNADSPLIVHRLDMATSGLLIIARTMNAYLDIQRQFKQHKVHKKYVARLSTPH
TNDKDGTISLPLRPDINDRPRQLVDHINGKEAITKYHFTETDRVELYPQTGRTHQLRMHC
AHNEGLANPIKGDELYGKKDKRLYLHAEELTFIHPTTKKEVTFFYKAEF
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgttccacaaattcactaattatccagatactctacctgtaagatttaacaatccattt
tattacgaacctgaccaactatgcttaaaagctgttgacgaggttaaaaattggatagag
aatgccgatgcaacatttctctcggaaatagaacaaggcaagatgtttggtgtcctaatt
gtggaaaataaaaaagaattaggatttatagctggctatagcggtcaaatatgtgggcgc
agtgactggaaaggttatgttcctgccgtatttgactatttgcaacctaacggatatttc
aagttgcatgaagctgagatatcatccattaacaaagaaataatatcatatgaaaacagt
gttgaaaaaagaaatgcggtagaggaattacaatcaacatgcaatgaagcaaaacttgaa
acagaaaaatataaagagtatataaaagaagtgaagtctgaacgtcctgagaataaacca
ttgacacaggaaatgattcaccaatcacaattcatgaaggctgaactgcataggatcaag
aaaagatattcatcactgatagctgaaaaacaagccgttgttgataatattaataaggag
ataaatacactaaagcaacagcgtcgacaaaaaagcgattacctgcaacgttggcttttc
aagcaattcatgatgctgaatgccaatggtgaacaaaaagaccttattgacatattctat
aattataacgagctacatacaattccaccagctggaagcggagaatgctgtgaaccgaaa
atgctacaatatgctttttcacacaatatgcgccctataagtatggcaatgttctggtgg
ggcaagagtccaaaagaagaaatacgccatcatctacatttctatcctgcatgcaacaat
aagtgtaagcctatattaaagtggatgcttcaaggcatagacgtagaacctaatgcttta
gaccgcgaagacagcagaacattagaaataatatacgaggacgaagatattgcaatcgtg
aacaaacctgcaggaatgctgagtgttcctggaaaaagtaatagacaaagcgtgtatagt
ataatgagaagcagatataaagacaatgctgatagtccacttatcgtacatcgcctagac
atggcgacaagcggtctgctaattatagcacgtacgatgaatgcatatcttgatattcaa
aggcagtttaaacagcataaagttcacaaaaaatatgtggcacgtctaagtacaccacat
accaatgataaagacggaacaatatctctcccattgagacccgacataaacgaccgtcca
agacaactcgttgaccatatcaacggaaaagaggctataacaaaataccacttcactgag
actgatcgtgtggagctgtatccacagactggcagaacacaccagttgcgcatgcattgc
gctcataatgaaggcttagcaaatccaataaaaggtgacgaactatacgggaaaaaagac
aagcgactatatctgcatgcagaagaactgacctttatacaccctaccacaaaaaaagaa
gttacattcttctacaaggcagaattttaa
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