Prevotella herbatica: prwr041_11810
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Entry
prwr041_11810 CDS
T08008
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
pher
Prevotella herbatica
Brite
KEGG Orthology (KO) [BR:
pher00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pher02000
]
prwr041_11810
Transporters [BR:
pher02000
]
Other transporters
Pores ion channels [TC:
1
]
prwr041_11810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
CILP
Dockerin_1
CooC_C
Motif
Other DBs
NCBI-ProteinID:
BCS85288
LinkDB
All DBs
Position
complement(1605889..1608789)
Genome browser
AA seq
966 aa
AA seq
DB search
MSLSAAAQNRTITGIVTDASDGEPLIGATIMLPGNTSGGAVTDLDGNFKIIVPQSTKILT
VSYVGYVSQQVSINGNNIVIKMQTDQKSLNEVVVIGYGTARRSDLTGSVSTVQSKDFNKG
MVSSPEQLINGKVSGVQIMSNSGSATAGSTIRIRGGASLNASNDPLIVLDGVPLEQGGIS
GNSSNFLSMINPNDIESMTVLKDASSTAIYGSRASNGVIIITTKKGAEGKLKIAFNTTNS
MQTRTKLIDMMSRNDFVNTIKSQGTTAQQALLGDANTDWNDQVYHTAFGTDNNLSLSGKV
GFLPFRVSTGYMNQNGLVKNDNVGRWTGNVVLSPSFFQDHLKVTVNAKGTYNNNQFYNSN
AIWAAATFNPTQPIYMSNQTYGGYYESLDASGLPVNGGVRNPLGLVDQNTSKSTVKRFIG
SVDLDYKLHFFPDMKLHATMGTDISEGKGTVYVPLEAASNYSTYGLDYAYGPQKNTNRLL
TLYANYSKNFEDIKSNVEATVGYDYQYWKSTTPAYATLDAKGDILSQVKASDYRHALLSY
YGRLNYSYDGKYLVTATMRRDGTSRFSPDTRWGTFPSIALGWTLTQENWLKDNKVLNNLK
LRASYGITGQQDGIGNYNYLPIYTQSVDGAQALMNGQYIYTYRPEAYVSNLKWETTSSWD
FGLDFGFLDNRLSGSFDFYTRKTKDLLATVPSAAGTNFAKNILTNVGNVDSHGIEFSLNA
NPIKTKDWDWNISYNLTWQKMKVKNLSLVKGSTATNILVGPSIDSYQFQVLSEGYEPYMF
YVYHQLYDQKTGKPIEGAYADLNHDGQINSSDLYRYKSPAPDYIMGLSSSLRYKKFTFSA
SFRANIGNYVYNGMAMSTGAWETVSYNSFQLNNLNNSYVKTGFKSRQYLSDYYVENASFL
KLDNLSLSYNFGNVGKYISGLTLSALVQNVFTITKYTGVDPEVPNGMDNSFYPRPRTYSL
SIGLQF
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtcattatctgcagcagcacaaaacagaactattacaggtatcgttactgacgctagc
gatggcgaaccacttatcggtgcaaccattatgcttccaggcaacacaagtggcggagct
gtaacagatcttgacggaaactttaagattatcgtaccacaaagtacaaagattcttact
gtaagttatgtgggatacgtttcacagcaagtatctatcaatggtaacaatattgtcatt
aagatgcagactgaccagaaatctcttaatgaagttgttgtaatcggttatggtacggca
cgcagaagtgatcttactggtagtgtatcaacagttcagtctaaagactttaataaaggt
atggtaagcagtcctgaacagcttatcaatggtaaagtttcgggtgtacagatcatgtca
aacagtggttctgcaacagctggaagtacgatccgtattcgtggtggagcatcattgaat
gcaagtaacgacccacttatcgttcttgacggtgtgccattggagcaaggtggtatatct
ggaaattcaagtaatttcctcagtatgataaatccaaacgacattgagagtatgaccgta
ttgaaagatgcttcttctactgccatatatggttcacgcgcatcaaacggtgttatcatc
atcacaacaaagaaaggtgctgaaggtaagctaaaaattgcttttaatacaactaacagc
atgcagactcgcacaaaacttatcgacatgatgagtcgcaacgattttgtaaacaccata
aagtcacagggaacaacagcccagcaggctcttcttggtgatgctaataccgactggaac
gaccaagtgtatcacactgctttcggaactgataataacttgagtttaagtggaaaagtt
ggtttcctgccattccgtgtttctactggatatatgaaccagaacggattagttaagaat
gacaatgttggtcgttggactggaaatgtagtattaagccctagtttctttcaagaccac
ttgaaagtaactgtcaacgcaaaaggtacatacaacaacaaccaattttataatagcaac
gcaatatgggcagcagcgacatttaatcctactcaacctatttacatgagtaaccagact
tatggcggatattatgaatctcttgacgcttcaggactgccagtaaacggtggcgtaaga
aatccattaggtcttgtagaccaaaacacatcaaaaagtacggtcaagcgcttcatcgga
agtgttgacctcgattataagctccatttcttccccgacatgaaattgcacgcgacaatg
ggtactgatatctctgaaggtaagggaacagtatatgtaccattagaggctgcttcaaat
tattcaacttacggacttgattatgcttacggtccgcagaaaaacacaaaccgtcttctt
acactctatgcaaactatagcaagaactttgaagatataaagagcaatgtagaggcaact
gtaggttatgactaccaatactggaagagcacaaccccagcttatgctacattggatgca
aagggtgacattctatcacaggtaaaggcaagtgactatcgtcatgcattgctttcttac
tatggtcgtctgaactattcttatgacgggaaatatcttgttactgcaactatgcgccgt
gacggcacatcacgtttctccccagacacacgttggggaacattcccttctattgctttg
ggatggacactgactcaggaaaattggttaaaggataacaaagtgctcaataatcttaaa
ctgcgcgcaagctatggtattactggccagcaggatggtataggcaactacaactatctg
cctatatacactcagagcgttgacggcgcacaagcactaatgaacggacaatacatatat
acatatcgtccagaggcatacgtttcaaatcttaaatgggaaacaacatcatcatgggat
ttcggacttgatttcggattcctcgacaatcgtctttctggaagtttcgacttttataca
agaaagacaaaagaccttttagcaacagtaccttcagctgcaggaacaaactttgctaag
aatattcttacaaatgtgggtaacgtagacagccacggtattgagttctctcttaacgcc
aatcctattaagactaaggactgggattggaacataagctacaaccttacttggcagaaa
atgaaagttaagaacctctctttagtaaagggaagcaccgcaaccaacattcttgtaggt
ccaagcattgactcttatcaattccaggtattatcagagggttatgaaccttatatgttc
tatgtttatcatcagctttatgaccagaaaactggcaaacctattgagggtgcatacgcc
gacttaaatcacgacggacagataaactcttctgatttgtatcgttacaagtctccagcc
cctgattatattatgggattaagttcatctttacgttataagaagtttactttcagcgca
agtttccgtgcaaacataggcaactatgtatataacggaatggcaatgagcacaggcgca
tgggaaaccgtaagctacaactcattccaattgaataatctgaataacagttatgtaaag
actggtttcaaatctcgccagtatttgtctgactattatgtagagaatgcatcattcctg
aaattggataatttaagcctcagctataatttcggaaatgtaggaaagtatatatctgga
cttacattatctgctttggttcagaatgtattcactatcacaaaatatacaggcgtagac
ccagaggtaccaaacggaatggataattctttctatcctcgtccacgcacttattcactt
agcattggtcttcaattctaa
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