Prevotella herbatica: prwr041_15540
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Entry
prwr041_15540 CDS
T08008
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pher
Prevotella herbatica
Brite
KEGG Orthology (KO) [BR:
pher00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pher03016
]
prwr041_15540 (truB)
Enzymes [BR:
pher01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
prwr041_15540 (truB)
Transfer RNA biogenesis [BR:
pher03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
prwr041_15540 (truB)
Prokaryotic type
prwr041_15540 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BCS85661
UniProt:
A0ABN6ELW7
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All DBs
Position
2162980..2163678
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AA seq
232 aa
AA seq
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MNKDFKAGEVFAIDKPYRISSFGALAHVRYVLSHELGYKVKIGHAGTLDPLATGVLILCT
GKATKRIEEFQGHTKEYTAILQLGATTVSYDMEHEENEHFPTEHITRELINSTLQQFIGD
IEQVPPTYSAVKINGDRACDLRRAGEEVTLKIKNVHIDEIEVTDFDAEKMLLSIRVVCGK
GTYIRALARDLGRALGSGAYLTALRRTRIGDFTIDKCLDYEQIKEWLVQTDK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggatttcaaggcaggtgaggtatttgcgatagacaaaccctaccgcatatca
agttttggcgcattggcgcatgtccgctatgtgctttcacatgaacttggatataaagtt
aaaattggtcatgctggaacgcttgatcctttggcaacaggagttttgatcttgtgtacc
ggtaaggcaacgaagcgaatagaggaatttcaaggtcatacaaaggaatatactgctatt
ttgcagttgggcgcgacaacggttagctatgatatggagcatgaggaaaatgagcatttc
cctacagaacatatcactcgtgaactaataaacagtacgcttcaacagtttatcggcgat
atcgaacaggttccgccaacatatagtgccgtgaagataaacggagatcgtgcttgtgac
ttgcgtcgtgctggtgaagaagtgacgttgaaaatcaaaaatgtacatattgacgagatt
gaggtaacagatttcgatgcagaaaagatgttgctcagtattcgtgtagtatgtggaaag
ggaacttatatacgtgctttggcacgtgacttgggacgtgcacttggcagtggagcatat
cttactgcattgaggcgtaccagaataggtgattttacaatagataaatgtctcgattac
gagcaaataaaagaatggttagtacaaactgataaataa
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