Prevotella herbatica: prwr041_16670
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Entry
prwr041_16670 CDS
T08008
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
pher
Prevotella herbatica
Pathway
pher02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pher00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
prwr041_16670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pher03021
]
prwr041_16670
Transcription machinery [BR:
pher03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
prwr041_16670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
KORA
Motif
Other DBs
NCBI-ProteinID:
BCS85774
UniProt:
A0ABN6ELC2
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All DBs
Position
2294045..2294917
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AA seq
290 aa
AA seq
DB search
MRQLKIQKSITNRSSEALDKYLVEIGRAPLISIDEEIDLAQKIRKGGVEGGRAKEKLVTA
NLRFVVSVAKQYQHQGLSLTDLIDEGNIGLVKAAEKFDETRGFKFISYAVWWIRQSILQA
IAEQSRIVRLPLNQVGSLNKINREINKFEQEFQRKPSLSELSTVTKIEEEKIDQSLMADS
HHVSIDAPFQDGEDNSMVDIMAGGDDSRTDRQVDHESMALELESVLKKVLKEREITIIRE
CFGIGCHEKGLEEIGDQLGLTRERVRQIREKSIAKLRDSGYAKILMKYLG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaaaattcagaagagtattacaaaccgttcaagcgaagccttggataag
tatctcgtagaaattggacgtgcaccacttatctccattgatgaggagatagatcttgcg
cagaaaatcagaaagggaggcgttgaaggaggacgcgccaaagagaaacttgttacagcc
aacttgcgatttgttgtttctgttgcaaaacagtatcaacatcaaggactttcacttact
gaccttatagatgagggcaatatcggtcttgtgaaagcagctgagaagtttgatgaaact
cgtggatttaagttcatttcttatgccgtatggtggattcgtcaaagtattctacaggct
atcgcagagcagagtcgtattgttcgtttaccattgaatcaggttggttcattaaataaa
atcaatcgtgaaatcaataagtttgaacaagagttccagcgtaagccttcactttctgaa
ctttctactgtaactaaaatagaggaagaaaagattgaccaaagccttatggctgatagt
catcatgtaagtatagatgcacctttccaggatggtgaggataatagtatggttgatata
atggctggtggcgatgatagccgtacagaccgtcaggtagatcatgaatcaatggcactt
gaacttgaatcagtattgaagaaggttcttaaagaacgcgagattactattatacgtgaa
tgttttggaattggatgccacgaaaagggacttgaggaaattggagatcagttaggactt
actcgtgagcgcgtcaggcagattcgtgagaagagcattgctaagttgcgtgatagtggt
tatgcaaagatcttaatgaaatatcttggataa
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