Prevotella herbatica: prwr041_17450
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Entry
prwr041_17450 CDS
T08008
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pher
Prevotella herbatica
Pathway
pher03420
Nucleotide excision repair
pher03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pher00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
prwr041_17450
03430 Mismatch repair
prwr041_17450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pher03400
]
prwr041_17450
Enzymes [BR:
pher01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
prwr041_17450
DNA repair and recombination proteins [BR:
pher03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
prwr041_17450
MMR (mismatch excision repair)
Other MMR factors
prwr041_17450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
RNase_T
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
DEDDh_C
AAA
Motif
Other DBs
NCBI-ProteinID:
BCS85852
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All DBs
Position
2413497..2416208
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AA seq
903 aa
AA seq
DB search
MSNTFIPDASQQKVIDINNGYHLVLAPPGCGKTQILACRVGHAHDVGVPYSEMLCLTFTN
RAARGMQQRINDNINDDTSDLFVGNVHRFCSRYLYDSCIVAASSSIIDDTDALSIMCQYT
NDDEQEVTASYKRMREYNEAIFLSHLMYQINHEYPRDLRLHADCLNSDDVKVLDAICKSH
KMPFTAKSMNDIYMNTDFYRDSCSELGMQQIIYVTLKKMQLARNYEKYKETNNLLDFEDI
LLLSYDSLKNKSLETTKESKSTYSWIQVDEVQDLNPLQLAIIDLLSPQEDNKVVVYLGDP
QQSIFSFMGAKMSTLELLSNRCKRNIHTLSHNHRSPKYLLDTFNAYAVETLNISPDILPT
TDYVPQTIGNELQLFQSETIDTEYLDAAQQAIRLGDESAEDTTAIIVSSNRDADAVSNAL
KTMHASHFKISGDDLFSSPQIKLLFAHLTILSNENNFIAWARLLNGMKVFQTTTAARNFV
QSCEDRAMLPLDFLLYEDSTYIQQFVRAYETKEITIFDTETTGLDVFNDDILQIAAVKIR
NGKIVDGSQLSIYLESDKPIPEMLGDIVNPIIEERKHQSLVSRKDALKKFLDYIGDSVLL
GHNADYDINILKNNVRRELGEEEINDKLMSPYIDSLRLIKLLRPQLRQYKLKYLLEMLHL
EGENSHLADADVDATRSLVEYCYSKAKEVVDSQLQFMQQKRVKDRVETLRDNYGKIYAET
RNMLWKETGDNKILVSKLKQMYDNLLAADIIQPLDNISYIFNYIASDVINSSDNSALITQ
LSNHMLEINTLKEADLCGSDTINEKIFVTTVHKAKGLEFDNVIVFDAIEGRYPNYYSKNN
KTMLDEDARKFYVAITRTRKRLIIMQSCFRVDYRGYRQPVPLTRFADSIKKSSNIWSVVS
NKK
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacacatttatacctgatgccagccagcaaaaagtgatagatatcaataatgga
tatcatttggttttggcacctccaggatgcggtaagacgcagattttagcatgtagggta
gggcacgcacacgatgttggagtaccatacagtgaaatgctttgtctaacgttcacaaat
cgtgcagctcgtggtatgcaacagcgaataaacgacaatataaatgatgatacatccgac
ttgtttgtgggtaacgtacatcgtttctgttcacgttatctatatgattcttgtattgtt
gcggcatcatcatcgattattgatgataccgacgcattaagtataatgtgccaatatact
aatgatgatgaacaggaagtgactgcaagttataagcgaatgcgagaatataatgaagct
attttcctttcgcatttgatgtaccagataaaccatgaatatccacgtgacctaagactt
catgctgattgcttaaatagtgatgatgttaaggtacttgacgctatttgtaaatcacat
aaaatgccgtttactgcaaagtcgatgaatgacatttatatgaatactgatttctataga
gatagttgtagtgaactaggtatgcagcagatcatatatgtgacgctgaagaaaatgcag
ttggctcgaaactatgaaaaatacaaagaaacaaacaatcttcttgactttgaagatatc
ttattattgtcttatgacagtttaaagaataaatctttagagacgacgaaagaatcgaaa
tcaacatattcatggattcaagttgacgaagttcaggatttaaatcctctccaattagca
attatagatttactttctccgcaagaagataataaagttgtagtatatctaggtgatccg
cagcaatcaatattctcatttatgggggctaaaatgtcaacattagaattacttagcaac
cgctgtaagaggaatatacacacattaagtcataatcaccgttctccaaaatacctgctt
gacacatttaatgcttatgcagttgaaactctgaatatttcaccagacatcttaccaact
acagattatgttccacaaactataggtaatgaattgcaattgtttcaatccgaaacgata
gatactgaatatctggatgcagcacaacaagcgataagactgggggacgaatcggcagaa
gacacgactgctattatcgtgagttcaaaccgtgatgctgacgctgtaagcaatgctttg
aagactatgcatgcaagtcatttcaaaatatcaggcgatgatttattttcgtcgccgcag
ataaaacttctttttgcgcatctcacgatattatctaatgaaaataactttattgcatgg
gccagactattaaacggaatgaaagtctttcagaccacaactgctgcacgtaattttgtg
cagtcatgtgaagatcgtgctatgttgccattagacttcttgttatatgaagattccact
tatatacagcagtttgtcagagcctatgaaacaaaagaaataacgatttttgatacagaa
acaactggattagacgtattcaatgacgatatattgcagatagcagcggtaaagatacgc
aatggaaagattgtagatggttcgcagttgtctatttacttggaaagtgataagccaata
ccagagatgctaggtgatatcgtgaatcctataatcgaggagagaaaacatcaatcgctt
gtgtcacgtaaggatgcgttaaagaaattcttggattacattggagactccgtactccta
ggtcataatgcagattacgacataaatatattaaaaaacaatgtaagacgagaacttggt
gaagaagaaatcaacgataaattgatgtcaccatacatagatagtttacgattgataaaa
ctattacgtccacagttgcgccaatacaaacttaaatacctgttggaaatgctgcatctt
gaaggcgaaaatagtcacctagccgacgctgatgttgatgcaacacgcagtcttgtggaa
tattgttattcaaaagcaaaagaagttgtggatagtcagttgcaatttatgcaacagaaa
agagtaaaagacagagtagagactttgcgtgataattatggtaaaatatatgctgaaaca
cgcaatatgctttggaaagagacaggagataataaaatattggtttctaaactgaaacag
atgtatgacaatcttttagcagcagatatcattcagccattagataatatatcatacata
ttcaattatatagcatcagacgttattaattcatcagataattcagcattgatcacccaa
ttgagcaatcacatgcttgaaataaacactttgaaagaagctgatttgtgcggtagtgat
acgataaatgaaaaaatattcgtgacaacagtgcacaaggcaaaaggattggagtttgac
aatgtaatcgtctttgatgcaatcgaaggcagatatcctaattattacagtaagaataat
aaaacaatgcttgatgaagatgctcgaaaattttatgttgcaataacaagaactcgaaag
cgactcatcattatgcagagttgctttcgggttgattatcgtggatataggcaacctgtg
cctcttaccagatttgccgattcaataaagaaaagttcaaatatctggtcggttgtatca
aacaaaaaataa
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