Prevotella herbatica: prwr041_19130
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Entry
prwr041_19130 CDS
T08008
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pher
Prevotella herbatica
Pathway
pher03030
DNA replication
pher03430
Mismatch repair
pher03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pher00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
prwr041_19130
03430 Mismatch repair
prwr041_19130
03440 Homologous recombination
prwr041_19130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pher03032
]
prwr041_19130
03400 DNA repair and recombination proteins [BR:
pher03400
]
prwr041_19130
Enzymes [BR:
pher01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
prwr041_19130
DNA replication proteins [BR:
pher03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
prwr041_19130
DNA repair and recombination proteins [BR:
pher03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
prwr041_19130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
T2SSK
Motif
Other DBs
NCBI-ProteinID:
BCS86020
UniProt:
A0ABM7NZW0
LinkDB
All DBs
Position
2623496..2627203
Genome browser
AA seq
1235 aa
AA seq
DB search
MEDFIHLHVHTNYSILDGQSKIPKLVDKAIKDGMKGMAITDHGVMFGIKELSDYCAGVNK
KRKAEGLEPFKPILGCEMYVAHHRLEDKVKDNGDNSGYHLIVLAKNYNGYKNLIKLVSKS
WVDGYYYRPRTDRFELEKYHEDLIICSACLAGEVPAKVLHNDLAGAREACEWYHRVFGDD
FYLELQRHEVKDPSLLANREAFPLQQKANKVLIEFAKEYGIKLICTNDVHFEDKETAEAH
DHLLCLATGRDLDDPNRLRYSKQEWFKTKAEMNEIFSDVPEAMANTLEVLDKVEIYSIEH
GPIMPFFPIPEDFGTEEEWRHKITEEQLYKEFTSDENGENQLSEEEGQKVIKRLGGYDKI
YRIKFEADYLDKLAYDGAKLLYGDPLPDNVVEHINFELHVMKTMGFPGYFLIVQDFIKAA
RTELGVMVGPGRGSAAGSVVAYCLGITKIDPLKYDLLFERFLNPDRVNLPDIDTDFDDDG
RGKVLRWVMDKYGHENCAHIITYASMATKNSIKDVARVERLPLEKSNMLCKAIPDRLPDG
LKMNLTNAIKCTPELREAEVSTDTRERNTIKYAKMLEGTVRGTGIHACGFIICRDPISDW
VPVSTADDPDFPGLKTAVTQYDGHVIESTGLIKMDFLGLKTLSELKEACKVIKKTVGDDI
DLDTIPIDDELTYKLYQEGRTIGTFQFESPGMQKYLRELHPTVFEDLIAMNALYRPGPMD
YIPDFIKRKHDPSLVTYDIPCMEKYLKDTYGITVYQEQVMLLSRQLASFTRGESDALRKA
MGKKKKAIVDAMKPKFIKQGKENGHDPKVLEKIWTDWEKFASYAFNKSHATCYSWVAYQT
AYIKAHYPAEYMAALMTRRFSQITEITKLMEECQNMKIATLGPDVNESYSKFGVNKKGEI
RFGLSAIKGMGEGAALAIVKEREDHGPYKDIYDFAERVDYSNVNRKAFESLALSGGFDSF
AFQREQYLAANSKGEVFLDVLVRYGQLFQTEQREAQNSLFGGEQAVEIARPQPVEAEGWS
NIEKLNRERDLVGIYISAHPLDEFSIILNTMCNTHCSELDNKQELAKKEEITLGGIVTGV
KSKFTKTGKPCGFVTLEDFEGSGELAFFGEDWGKWRGLLTEGCIVYIKAKCQQKYRDSDY
YDFRISDIQYMQTVKANRLEKFTITINSDAIDETVVTDISTMVEKAVGNTQLYIQVIDQE
HNVSMMLRSNNHSIEIKKDLLNYIESNPEMSYHVN
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggaagacttcatccacttacacgttcataccaattattctatccttgacggacagtca
aagatacctaaactagtagacaaggctatcaaagacggcatgaagggcatggcgatcacc
gatcacggtgtgatgttcggcataaaagagttatctgattattgtgcaggagtaaacaag
aagcgaaaggcagaggggcttgaaccattcaagcctattctgggatgcgagatgtatgtt
gctcatcatagattggaagataaagtgaaggacaatggtgacaattcaggttaccacctt
attgtcttggcaaagaactataatggttacaaaaatcttataaaactagtcagtaagtct
tgggtagatggttattattatcgtccacgtacagacagatttgaacttgaaaaatatcat
gaagatcttattatttgttctgcttgtctagcaggtgaggttcctgcaaaagttcttcat
aatgatttggctggtgctcgtgaagcttgtgaatggtatcatcgagtgtttggtgatgac
ttttatttggagttgcagcgtcatgaggtgaaagacccttccttactggcaaacagagaa
gcatttccacttcaacaaaaagctaacaaagtcttaattgagtttgctaaagaatatggt
ataaagcttatttgcacaaatgatgttcactttgaggataaggaaactgctgaagctcat
gaccatttgctttgtctagcaacaggtagggatctagatgatcctaaccgtttgagatat
agtaagcaggaatggtttaagaccaaggctgagatgaacgagatattctcagatgttcca
gaagccatggctaatactttagaggtgcttgataaggttgaaatatacagtattgagcat
ggacctatcatgccttttttcccgataccagaggatttcggtacagaagaagaatggaga
cataagattacagaggaacaactttataaggagtttacttctgatgagaacggagaaaat
cagttgtctgaagaggaagggcagaaagttattaaacgattaggtggatatgacaaaata
tatcgcatcaagtttgaagcagactatcttgataaattggcttatgatggtgctaagtta
ctatatggtgatcctttaccagataatgtagttgagcatattaactttgagcttcatgtg
atgaagaccatgggttttcctggatacttccttatcgtgcaggactttattaaagcagcg
cgtaccgaattgggagttatggtcggtcctggacgtggatccgcagccggttctgttgtt
gcctattgtttgggaattacaaagatagatccattgaaatatgacttgctgtttgaacgt
ttcttgaatccggaccgtgtaaaccttcctgatattgataccgactttgatgatgatggg
cgtggaaaggtgctccgttgggttatggataagtatggtcatgagaactgtgcgcatatc
attacctatgcaagtatggcgacaaagaactcaataaaggatgtcgcacgtgtggaaagg
ttaccactggaaaagtcaaatatgctttgtaaggctattcctgaccgtttgccagatggc
ttgaaaatgaatcttacgaacgccattaaatgtacccctgaattgagggaggctgaagtg
tcaactgatacacgtgagcgtaatacgattaaatatgctaagatgcttgagggtacggtg
cgtggaactggtattcatgcctgtggtttcattatctgccgcgaccctataagtgactgg
gttcctgtttctacagctgatgaccctgattttcctggattgaaaactgccgtaacacaa
tatgatgggcacgtgattgagtcaacggggcttatcaagatggacttcttgggattaaag
actctttcggagttgaaggaagcttgcaaggttatcaagaagactgttggtgatgatatt
gatctggacacaattcctattgacgacgaacttacctataaactatatcaggaaggacgt
acaatcggaacattccagtttgagtctcctggtatgcagaagtatctacgtgaacttcat
cctacagtattcgaggaccttattgccatgaatgctttgtatcgtccaggaccaatggat
tatataccagactttattaagagaaagcatgatccgtctcttgttacttatgatattcca
tgtatggagaagtatcttaaggatacttacggtatcacggtatatcaggagcaagttatg
cttctttcccgtcagttggctagtttcactcgtggtgagagtgatgcgttgcgtaaggcg
atgggtaaaaagaagaaggctattgttgacgcaatgaagcctaagttcattaagcaggga
aaagagaatggtcacgatcctaaggtcttggaaaagatatggaccgactgggagaagttt
gcttcttacgctttcaataagtctcatgcaacatgttattcttgggtagcttatcagact
gcatatatcaaggctcattatccagctgaatatatggctgcgctgatgactcgtcgattt
agtcagattaccgaaatcaccaagttgatggaggagtgtcagaatatgaagatagccact
cttggaccagatgttaacgagagttactctaagtttggtgtaaacaagaaaggtgaaatt
cgtttcggtctgtcagccattaaaggaatgggagagggggctgctcttgctatcgtgaag
gaacgagaggatcatggaccttacaaagatatatatgattttgctgaacgtgttgattac
agcaatgtaaatagaaaggcttttgaatctcttgctttgagtggtggctttgatagtttt
gcattccaacgtgaacagtatttggcagctaattcaaaaggagaagtattccttgatgtg
ttagttcgttatggtcagttgtttcagacagaacagcgtgaagctcagaattcactcttt
ggtggagagcaagctgttgagatagcgcgccctcagcctgtagaagcagaaggttggagt
aatattgaaaaattgaatcgcgagcgagatcttgttggaatatatataagtgctcatccg
ctagatgaattcagtatcatcttgaatacgatgtgcaacactcattgttcagaactagac
aataagcaagagttggcaaagaaagaagaaataactttgggcggtattgttactggagtt
aaatcaaagtttactaagactggtaaaccatgtggctttgtcacgttagaagattttgaa
ggtagcggtgaacttgcttttttcggtgaagactggggcaaatggcgaggattgcttacc
gagggctgcatcgtgtatatcaaagctaagtgccagcagaagtatcgtgatagtgattac
tatgatttccgcatttctgatattcagtatatgcagacagtgaaggcaaatcgcctagag
aagttcactataacaatcaacagtgatgcgatagatgagactgtggtcactgatatttct
acaatggtagagaaggctgttggtaatactcagttgtacattcaggtcatagatcaggaa
cataatgtgagtatgatgttacgttcaaataatcattcaatagagataaagaaagacttg
ctgaattatatagaaagtaatcctgagatgtcttatcatgtaaactag
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integrated database retrieval system
