Prevotella herbatica: prwr041_19310
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Entry
prwr041_19310 CDS
T08008
Name
(GenBank) starch-binding protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pher
Prevotella herbatica
Brite
KEGG Orthology (KO) [BR:
pher00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pher02000
]
prwr041_19310
Transporters [BR:
pher02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
prwr041_19310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
BCS86038
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All DBs
Position
complement(2657478..2659286)
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AA seq
602 aa
AA seq
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MKKYIKLSILALSLAGLSSCDMDAPNQSSLDPSVVGYTEKMAESAIMGIHQSFGETNSYR
GRFIPYYGMNTDVEMINIPTLAQTPDGAKYDLCAYNATPNNTLMNTSNNAYAKFYEGIER
ANMVIDAIKQYGDPANRPEMAQLLGEGMTLRAVLYLDLIKGWGDVPARFEPISTNTMYQE
RTDRDSIYVRLLSDLKEAEDMMPWPNDNDKTKNVERVSKSFVKGLRARIALYAAGFSYRA
DGTVRRSNAPALSVDNMYKIARDECEDVINSGKNKLGDFKTNFTNLCMDKTDAGNESLWE
VPFSDGRGRVLYTWGVKHNAKDQYTKQAQGGVNGPLPYLYYDYDNEDVRRDITCVPYDWS
NESQSKQQLRKVSKWCFGKLRYEWMGRIVTSTNDDGVNFQYMRMADIYLMAAEAINQLSG
PSDAWGYMEPVLSRVLPAEKVATLKNKYTANKDAFFNGIVEQRGLEFAGEQLRKADLIRW
NLIDDKLAEAKTKMQALRTRTGAYADLPGSVYTKTAADGETLIIYGLNHGDTDDEGANLV
SLNGYEKTSWLEPDSKTGVLKIDDDLINGLYINTPSTHAIWPIWQTFVDNSNGKLNNTWL
GF
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatatataaaactatcaatacttgcattatcattagccggactaagttcttgc
gatatggatgcaccaaaccaatcttcgcttgaccctagtgttgttggatatactgaaaaa
atggctgaatctgccataatgggtattcaccagtcatttggagagactaattcatatcgt
ggtcgtttcattccatattacggaatgaataccgatgttgagatgataaacatccctact
ttggcacaaactccagacggtgcaaagtatgacctatgtgcttacaatgctacaccaaac
aatactcttatgaatacatcaaacaatgcgtatgcaaagttttatgaaggtattgaacgt
gccaacatggtaatagatgcgataaagcaatatggtgaccctgcaaatcgtccagaaatg
gcgcaattgctcggtgagggcatgactcttcgtgccgtactttatcttgacttgataaaa
ggatggggagatgttcctgcacgctttgagcctatttcgactaatacaatgtatcaggaa
cgcacagaccgtgattctatctacgtaagactgctttccgacctcaaggaggccgaagat
atgatgccttggcctaacgacaatgataagactaagaacgtagaacgtgtcagcaagtct
tttgtaaagggacttcgtgcacgcatcgcactctatgcagctggatttagttaccgtgca
gacggaactgtaagaaggagtaacgctccagccctctctgtggacaacatgtataagatt
gcacgtgacgaatgtgaagacgtcatcaacagcggaaagaataaattaggtgacttcaag
acaaactttacaaacctttgtatggacaaaactgatgcgggtaacgaaagtctctgggaa
gttcctttctctgacggtcgtggacgtgtactatatacttggggcgttaagcataatgcc
aaagaccagtacacaaagcaggcacaaggcggtgtaaacggtcctttaccttatttgtat
tatgattacgacaatgaggatgttcgtcgtgacattacttgtgtaccatacgactggagc
aacgagtcacaatcaaagcagcagctgcgcaaagtaagcaaatggtgtttcggcaaactc
cgctacgaatggatgggccgcatcgttacatcgacaaacgatgacggtgtcaacttccaa
tatatgcgaatggctgatatttatctaatggcagcagaagccattaaccaacttagtggt
cctagcgatgcatggggatatatggaaccagtgttgtcacgcgtattgccagcagagaag
gttgctactcttaaaaataaatatacagcaaacaaagacgcattcttcaatggtattgtt
gaacagcgcggacttgaatttgcaggtgagcaacttagaaaagctgaccttatacgttgg
aaccttattgatgacaaacttgctgaagcaaaaacaaagatgcaggcattaagaactcgc
actggtgcttacgcggacttaccaggaagtgtatataccaagactgctgcagatggcgag
acccttattatctatggtcttaatcatggagatacagatgatgaaggtgcaaaccttgtt
agcttgaatggatacgaaaagacttcatggcttgaaccagactctaaaactggtgtatta
aagattgatgatgatctcattaacggtctatatatcaatacgccaagtacacatgcaatc
tggcctatctggcaaacattcgttgacaacagtaatggtaagctaaacaacacatggctc
ggattttaa
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