Porcisia hertigi: 94287237
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Entry
94287237 CDS
T10408
Symbol
JKF63_01111
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
phet Porcisia hertigi
Pathway
phet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
94287237 (JKF63_01111)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phet03041
]
94287237 (JKF63_01111)
03009 Ribosome biogenesis [BR:
phet03009
]
94287237 (JKF63_01111)
Enzymes [BR:
phet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
94287237 (JKF63_01111)
Spliceosome [BR:
phet03041
]
Complex A
U2 snRNP components
U2 related factors
94287237 (JKF63_01111)
Complex B
94287237 (JKF63_01111)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
94287237 (JKF63_01111)
Ribosome biogenesis [BR:
phet03009
]
Eukaryotic type
90S particles
Helicases
94287237 (JKF63_01111)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
WHD_HA2
DEAD
HA2_C
AAA_22
ResIII
Cas3-like_C_2
AAA_19
AAA_7
ABC_tran
AAA_16
T2SSE
nSTAND3
SRP54
TsaE
nSTAND_NTPase5
AAA_30
Motif
Other DBs
NCBI-GeneID:
94287237
NCBI-ProteinID:
XP_067753317
UniProt:
A0A836L9L2
LinkDB
All DBs
Position
35:<512596..>514713
Genome browser
AA seq
705 aa
AA seq
DB search
MEAKHGSRNPLTGKQFSSRYFTLLKGRERLPIFAAKSRIQNLVNRYQTLLLVGETGSGKT
TQVPQYILELKPERGIACTQPRRVAATSVSERVAEEMDVVLGEEVGYSIRFDDKSSEKTR
LKYLTDGMLLREAMTDPLLRRYSVIVLDEAHERTVSTDILIGTLKELLPKRPDLRIIVMS
ATLEEKRFQEYFSEAPLVHISGRMYGVEIYNSKTPEANYVEAAIRTATQIHLYEGEGDIL
IFLTGEDEIETTVERLQTGIRMAEHSSSNCHHGPVAVLPLYSALPPSQQRKVFQTVPEGT
RKIVVATNVAETSLTIDGVVFVIDCGFSKQKVFNPKLRVESLLVTPISQASARQRCGRAG
RTRPGKCFRLYTAKSFHSALQPNTYPEILRCNLGSIVLHMKKMGIEDLVNFDFVEPPAPE
TLMRALELLNYLGALDDDGNLTEEGSLMSEFPVEPEMASMLFHSPKFGSSDDVARICAML
SVQNPFITPSNDQRGRAMRCREQFYHSTGDHIAYLNVFNEFYEVRHQSTSWCTENYINPR
VMKQAVNIYRQLVGIMQRLNLTICSTYTAQQRRVQGGDVPAELEFANELRRAIVKGYFTK
VALSLPTKHQFMTLKDDVKCLLFPSTYLNRRPKFVVFNELVLTSNTYIRTVTAVSEEWLL
ESSPSYFAQDEFEGVAKQVFADIFRRQGKEKERRSKRARSLTDDD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaagcacggcagccgcaatcctttaacgggaaagcaattcagctcccgttat
tttactcttttgaaaggtcgcgagcggctccctatttttgccgccaagtcgcgtattcaa
aatttggtgaatcgatatcagacactacttctcgtcggagaaacaggcagtggaaagaca
actcaggttccgcaatacattttggaactcaagccggagcgcggtatcgcttgcacacaa
ccccggcgtgttgcggcaacgagtgtcagcgagcgcgtggctgaagagatggatgtcgtg
ctcggcgaggaggtaggttactcgatccgcttcgatgataagagttctgaaaaaacacgt
ctaaaatatctgacagatggtatgcttctgcgcgaggcgatgacggacccgctgttgagg
cgctacagtgtgattgttctcgatgaggctcatgagcgtaccgtgtcgacggacattttg
attggcacattgaaggagcttcttccaaagcggccggatcttcgtattatagtgatgtcc
gcgacccttgaggaaaaacgctttcaggaatacttttcggaggcaccgctggtccatata
tccggtaggatgtatggtgttgagatctacaactctaaaacacccgaagccaactacgtg
gaggctgctattcgcacagcaacgcagattcatctttatgaaggcgagggtgacatactt
atttttttgaccggtgaggatgagatcgagacgactgtggagcgcctccaaaccggaata
cggatggcggagcacagcagcagcaattgtcaccacggccccgttgccgtcttacccttg
tactctgccctacccccatcacagcagcgaaaggtgtttcagacagtgcctgaaggaacg
cgcaagatagtcgtagcgacaaatgtagcggaaacttccttgacaatcgacggcgtcgtt
tttgtgattgattgcggcttttcaaagcaaaaggtttttaacccgaagctccgagttgag
tcgctgcttgtaactccaattagtcaagcaagtgctcggcagcgctgcggccgtgccggg
cgaacgaggccagggaagtgctttcggctctacacagcgaaatcatttcactctgctctc
cagcccaacacataccctgaaattcttcgttgcaaccttggcagtattgtgttacatatg
aaaaaaatgggtatcgaggatttggtcaacttcgattttgtggaaccgcctgcccctgaa
acgctaatgcgcgcgttggagttgctcaattaccttggtgcactggacgacgacggcaat
cttactgaggaggggagtttaatgtcggagtttcccgtagagccagaaatggcatctatg
cttttccatagccctaaatttggatcctccgatgatgttgcacgaatttgtgctatgctc
tcggtgcagaatccatttatcactccctcaaatgaccagcgaggtcgtgcgatgcggtgc
cgcgaacaattttaccactcaacaggggatcacattgcctacttgaatgtcttcaatgaa
ttctatgaggtgagacatcaaagcacctcttggtgtactgagaactacatcaatccccgg
gtgatgaagcaggcggtgaacatttaccgccaacttgttgggatcatgcaacgccttaat
ttgacaatttgcagcacatatacagcacagcagcggcgcgtacagggtggtgacgttcct
gcggagctagaatttgcgaacgagctgcgccgtgccattgtgaaggggtacttcacaaag
gtggcgctttctcttccgacgaagcaccagtttatgacactcaaagatgacgtgaaatgc
cttctttttccatcaacatacctgaaccgccgtcccaaatttgtggtgttcaacgagcta
gttctcactagcaacacgtacatcagaaccgtgacagctgtttccgaagagtggttgctg
gagtcaagcccttcgtactttgcccaggatgaatttgagggcgttgcaaagcaagttttt
gctgacattttccggaggcaaggcaaggaaaaagagcgtcggtcgaagcgagcgcggtca
cttactgatgatgattag
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integrated database retrieval system
