Porcisia hertigi: 94287520
Help
Entry
94287520 CDS
T10408
Symbol
JKF63_01396
Name
(RefSeq) hypothetical protein
KO
K12856
pre-mRNA-processing factor 8
Organism
phet Porcisia hertigi
Pathway
phet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
94287520 (JKF63_01396)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phet03041
]
94287520 (JKF63_01396)
Spliceosome [BR:
phet03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
94287520 (JKF63_01396)
Complex C
U5 SnRNP specific factors
94287520 (JKF63_01396)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
U5_2-snRNA_bdg
PRO8NT
RRM_4
PROCT
DUF5480
Motif
Other DBs
NCBI-GeneID:
94287520
NCBI-ProteinID:
XP_067753600
UniProt:
A0A836KZE1
LinkDB
All DBs
Position
35:<1506189..>1513466
Genome browser
AA seq
2425 aa
AA seq
DB search
MSASVPPGFSDDDGGFVEVDPALLAEMDREEQEESRKQKMLEWRRMNTERYGFRSAYRAA
VGEKDLMPPEFIRKVVKDNGDLGGKRFKSERKLCVGMLPYIPLALFKLLENMPMPWEETR
YVTVVYHVGGVLTIVDDTPTVAEPLYVSQWGTMWTKMRANKVELLQEGGGFRRAVHKGDE
NEPPLDFANYLMDRVPPPPVHDELDEEDNVGIAGWFYDPFPRLVAPNQIRGFRRPNGYYF
TLDVMEALYRNASPILPTLDDRNYFYLWDLKSFYAAKAMHLSIPRGPKFEAPPAVRVKQG
EDDDWTEFNDLRRIIHRDNPRKPRFTMLTERQIAFPFLYGSVVDGVELAPYHYPPTVRVE
NDDPELSCFTFHPSLNAIKAVEKKYRDVPRAQAALCSSTWARAGGQGVEDAADVPLALPD
DFEPFLSSLPLEQPNTKTGLSLLFAPAPYNSFEGGMKRRIDVPLCDKWYQDPPDLLTSDD
RDKILRSYTQLLKHHVKRSLQHTVRQRSSAAAAAEVAAGTDMGATRENRRLEKMAEMRYF
SKTRMEWLEAALQVMRQGHNMLVQLVNMKCLPYVHIDYNFEAKPTRTLTTKEIKKSRLGP
AFHMIRELLGFMKRLIDMHVIYRLGSTDALQLADATHYLFSHVGVLTGVYRYKLRAMRQI
KRTRDLKHMLYSKFNVGGVPSGPGNGFWGPSWRVWVFFMRGMTPLLQRYLSNLTDRVLHG
RVQKGKSAGKKITRQRVEPDKDVNIKEAFRRELREMLPNNVKSSVIVTMDQHMNEAFRHW
RAGLSWSVPGLAKPLADLVGKYVKLRSEEYIRTTQLQRCRIAAGDTVDKQAFMKNLGRLT
RLKIMDEQRRQRRYMTGEDAATIMAPDEATEIYRMMANWLNDRGFKKIPFPDPAKIAELS
LLQLSLNKLRDQHNIANRLTANQREEQARIEESFNAPHEALSRIVDALAHQRRFKNVEVE
YMDNFSHLYPLYNVVPQEKMIDSFLDQYLWYKAMNVQRLFPNWVKPSDVEPLPHLLYKWC
EGINNIPDIWDVSHEESVVLLHSNLEDAFYDHVDWNFFRPMLELIMDKSLVDYIVSRHDV
VVEFKDMSYHHYKGLLRGFMFSSFLAQYWGLVMDVLLLGTQRSKEMAGTALKPNPFMSFF
RDPYLATSHPIRAYCRYKNEVYILLRYSKTEADDIRRRYLEETKSDPEMRALNASVYGFK
NAKEWPRDARMRLFLSDVNLARAVLWEFRGRLPPSMATISDSNSFVSVYSKDNPNLLFEM
AGFSVRLLPVVRTEADILENESMWSLRNHTTKDISCRAFLQVTKEHINMIRNKARRTVMM
VGSSTFHSIAAKWNALITEIVPYYREAILGTEELQAILARAEHRMQARVMMALNSRAKSR
FPPAMFYAPSDLGGLGMLSVGHSLIPAKDTVYSKTTSTGVQFFYAGLTNEEGIPIPNVLQ
YYTPWETEIKESERAWLEFRTREREAKARGGRVSLDDIEDIIDKGIPRIRVRFSRHAPLF
HFDTGFRARMEFQRYLAGKYLKNWWFHMEHDGNICGGVMERYRADMNNALGGVEAILEHS
LFKGTGFPSWEGIEFDRSGGFENSKKDTKLAKQQRAGLSKVPNQRFALWWSPTINRSDIQ
AGFESKVETTGVFMCGKLETIKKSLIKIFSGSLWEKSHGAVVNDVASKLKDSLIDLGAAS
ITLQQQHPQKSYTFTSSAADIILASAARWSVSSKPTTLADEVGDVYQHHSTSKFWIDVQL
RWGNYDSHNIAEYARKKFYEYSTARMYPFPAGIVVAIDLAYNCHSAFGYWIPGMKPFMNK
LMPVIMKNNITLNTLRDRMKRDLGLFSSAPTEASLSDTNIAELFSSGMRTWIVDDSATYV
TSEQPTPDGGKKFKSENGAVLVFEPISGSLKMSVVHRSVFAGQKRRSKLAREKAAEEIAS
WLRSCPPSERPSKIIVTRSRFRQTLHNMLVLDYPNIIIGQSDLNLPLPMALRHSRLVELR
IAAMESKGWEFCIYDDWQQSLQFQPITCFNLLNLVLRGYHVNLQRTRQILVPDLHVEVGA
AHFWPTYATRQEWEQVSIRLQEMIIADAARRMNVSPKDFTEKEKEGILLGKRMTNVEIQQ
EEMKEIEAMRRTKLSEAQTVNVVTSSGDVTKRKVKAAFDFGAAALNNNWRPRSLADAVFL
DENTTITFDAAGATGASDQLIFSEDAVQKLLACCDVKVQCCAYMFGHALPDSPNIKEVLC
IMIPPQFGTAVEARTPPRIPFDAPALQEANLSFLGLMRIGESEAQLTSHDLALQARALIA
NEEMVPQGFLTAVLEMSVEGVMARCYSTTAEGIAWAQKEYEGLLKKIPAATDPAFSTPCR
GTLSSEARSFFLVPVERAWNYYFKGALWRENTEYDVVVDVPLTFFDALHRPDHFLNFIRM
GDDADAIDEADPNDLFGNEVGVGGE
NT seq
7278 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcatcggtccctccggggttctcggacgacgatggcggctttgtcgaagtagac
cctgccctgctagcggaaatggatagggaagagcaggaggagtcgagaaagcagaagatg
ctggaatggcggcgtatgaacacggagcggtatggctttcgctccgcgtaccgggcggcg
gtgggggagaaggacttgatgccgccagagttcatccgaaaggttgtgaaggacaacggc
gaccttggcggaaaacgcttcaaatcggagcgaaagctgtgcgtaggcatgctgccttac
ataccactggctttgttcaagctcctggaaaatatgccgatgccctgggaggagacacgc
tacgtgaccgtagtgtaccacgttggcggtgtactcaccatcgtggacgacactcccacg
gtggcagagccactttacgtgtcgcagtggggcacaatgtggacgaagatgcgcgccaac
aaggtggagctgcttcaggaaggtggtggctttcggcgcgcagtgcacaagggtgacgaa
aatgagccgccgctggacttcgccaactacctcatggaccgcgtcccgcccccgccggtg
cacgacgagcttgacgaggaggataacgtcggtatcgcgggctggttttacgaccccttt
ccccgcttggtggcaccaaaccagatccgcggttttcggcggccgaacgggtactacttt
acccttgatgtgatggaggcgctctaccgaaacgcatcgcctattctcccgacactcgac
gaccgcaactacttttacttgtgggacctgaagtccttctacgctgctaaggcgatgcac
ttgtctatcccacgcggcccaaaatttgaggctccgccggcagttcgcgtgaagcagggc
gaggatgacgattggaccgagttcaacgaccttcgccgtattattcaccgcgacaacccg
cgaaagccgcgttttacaatgctgacggagcggcagatcgcctttccgttcctgtatggc
tcagtagtggacggggtcgagctggcaccgtatcactatccccccaccgtgcgcgtggag
aacgatgaccccgagctgtcgtgctttacattccatccctcgctgaacgccatcaaggct
gtggaaaaaaagtatagagacgtgccgcgagcgcaggcagctctgtgctcctctacctgg
gctcgcgctggcggccaaggtgtcgaggacgccgcggatgtgccgctggcgttgccggac
gactttgaacccttcctgtcatcgctaccgctggagcagcccaatacgaagacgggtctg
tcgctgctcttcgcgccagccccctacaattcttttgagggaggcatgaagcgacgcatt
gatgtgccactgtgcgacaagtggtaccaggacccaccagatttgctcacttcagatgac
cgcgacaagattctgcgcagctacactcagctgctgaaacaccacgtcaagcgctccctg
cagcacaccgtgcgccaacggagcagcgccgccgccgccgctgaggtggcagcggggacg
gacatgggtgccacacgcgagaatcgtcgtctggagaagatggcagagatgcgctacttt
tccaagacgcgcatggaatggctagaggcggcgttgcaagtgatgcgacagggtcacaac
atgcttgttcagctcgtcaacatgaagtgcttgccgtacgtgcacatcgactacaatttt
gaggcgaagccgacccgcacattgacgacaaaggagattaagaaaagccgtctcggtccc
gcgttccacatgatccgtgagctgctaggtttcatgaagcgacttattgacatgcatgtg
atttatcggctaggatcgactgatgcgctccagttggcagacgccacgcactaccttttc
tcccatgtcggcgtgctgacaggcgtgtaccgctacaagctgcgggcgatgcggcagatc
aagcggactcgtgatctcaaacacatgctgtacagcaagttcaacgttggcggcgttccg
agcggtcctggaaacggtttttggggtccgtcgtggcgggtgtgggtatttttcatgcgc
ggcatgacgccgctactgcagcgttacctgagcaatttgaccgatcgcgtgctgcacggc
cgtgtgcagaaggggaagtcagccggcaagaaaatcacgcgtcagcgggtcgagcccgac
aaagatgtcaacatcaaagaggcgttccgtcgtgagctgcgggagatgttgcctaacaac
gtgaagagctctgtcattgtgacgatggaccagcacatgaacgaggcgttccggcactgg
cgtgcggggttgtcgtggagcgtgcctgggcttgcgaaaccgctagcagacctcgtcggc
aagtatgtaaagctgcggtctgaggagtacattcgcacgacgcagctgcagcggtgccgt
attgcagcaggggacacggtggacaagcaggcgttcatgaagaacctagggcgcttgacg
cgactgaagatcatggatgaacagcgtcgccagcgccggtacatgacgggggaggacgct
gccacgatcatggcgcccgatgaggcgacggagatctaccgcatgatggcgaactggctg
aatgaccgcggctttaagaaaatcccctttccggacccggccaagatagcagagctgtca
ttgttgcagctctctcttaataaactgcgcgaccagcacaacatcgcaaaccggctcact
gcgaaccaacgtgaggagcaggcccgcatcgaggagtcgtttaacgcgcctcacgaagcc
ctctcccgcattgttgacgcccttgcccaccagcgccgcttcaagaacgttgaggtggag
tacatggacaacttttcccacctgtaccccctctacaacgttgtcccacaggaaaagatg
atcgattcgtttctcgatcagtacctatggtacaaagcaatgaatgtgcagcgtctcttt
ccaaactgggtaaagccgtctgatgtggagccgctgcctcacttgctctacaagtggtgc
gagggtatcaacaacatccctgacatatgggatgtctctcatgaggagtccgtggtgcta
ctgcacagcaacctggaggacgcgttctatgaccacgtggactggaactttttccgtccg
atgctggagctgattatggacaagtctctggtcgactacattgtgagtcgacacgacgtt
gtggtggagttcaaggacatgagctaccatcactacaagggacttctccggggctttatg
ttctcgtcattcttggcgcagtattgggggctcgtgatggacgtgctgctgctcggtaca
cagcggagcaaggaaatggcgggtacagcgttgaagccgaaccctttcatgtccttcttt
cgagatccctatcttgccacgtcacacccgattcgcgcgtactgcaggtacaagaacgag
gtgtacatcctgctgcgctactccaaaaccgaggcagatgatatacgacgtcgctacctg
gaggagaccaagtcagatccggagatgcgcgccctcaatgcatcggtgtacgggttcaag
aatgcgaaggagtggccacgcgacgcgcgcatgcgtcttttcctgtctgatgtcaacctg
gcgcgcgcggtgctgtgggagttccgtggccgcttgccgccctcgatggcgaccatcagc
gactcgaacagcttcgtcagcgtctattccaaggacaaccccaacctcctcttcgaaatg
gcaggcttctccgtgcggttgctgcccgtggtgcgtaccgaggcagacatcctcgagaac
gagtcgatgtggagtctgcgcaaccacaccaccaaggatatctcctgccgagcgtttctc
caggtgacaaaggagcacatcaacatgatccgcaacaaggcacgccgcactgtcatgatg
gtcggcagctccacctttcatagtattgcagccaagtggaacgcactgattacagagatt
gtaccgtactatcgcgaagcgattctcgggacagaggagctacaggcgatcttggcgcgc
gcggagcaccgcatgcaagcgcgggtgatgatggcgctgaactcgcgtgctaagtcgcgc
ttcccaccggcgatgttttacgctccatccgatttaggtggcttgggcatgctttctgtt
ggacattcgctgatcccggcgaaggacaccgtgtactcgaagacgactagtaccggcgtc
caattcttctacgctggcctcaccaacgaggaggggatccccatccctaacgtcctacag
tattacacgccatgggaaacagagatcaaggaaagtgaaagggcatggctggagttccgc
acccgcgagcgtgaggcaaaggcgcgcggcggccgcgtgtcgctcgacgacatcgaggac
atcatcgacaaaggtatcccacggatccgcgtgcgcttttcgcgacatgcgccactcttc
cacttcgataccggcttccgcgctcgcatggagttccagcgctacttggctggcaagtac
ctgaagaattggtggttccacatggagcacgatggcaacatttgcggcggtgtgatggag
cgctaccgcgctgacatgaacaacgcccttggtggggtggaggcgatattggagcacagt
ctttttaaggggacgggctttccttcgtgggagggaatcgagttcgaccgctctggcggt
tttgaaaattcgaagaaggatactaagctggcaaagcagcagcgtgccggtctgagcaaa
gtaccaaaccagcggttcgccttgtggtggagtcctacaatcaaccgctccgacatccag
gccggtttcgagtcgaaggtggagacgacgggtgtcttcatgtgtggcaagttggagacc
ataaagaaatccctcattaagatcttcagcggttctctctgggagaagtcgcacggtgcc
gtcgtgaacgatgtggcgagcaaactgaaagacagcctcatcgaccttggtgcagcttcc
ataacgttacagcagcagcacccacaaaagtcgtacaccttcacgagctcggctgccgac
atcatcttggcgagcgcggcgcgctggtcggtgtcgtcaaaaccaaccaccctcgctgac
gaagtcggcgacgtctatcaacaccacagcacctcgaagttctggattgatgtgcagctg
cgctgggggaactacgacagccacaacatcgccgagtatgcgaggaaaaagttctacgag
tattccacggcccgcatgtatccgtttcctgccggcattgtcgttgcgattgacctggcg
tacaactgccacagcgcctttggatactggatccctggaatgaagccgttcatgaacaag
ctgatgcccgtcatcatgaagaacaacatcaccctcaacacgctgcgcgaccgcatgaag
cgtgatttgggactcttcagctcggccccgacggaggcgagcctttctgacacaaacatc
gccgagctgttctcgagcggcatgcgaacgtggattgtggacgacagcgccacgtatgtg
acaagcgagcagccgacaccggacggcggcaaaaagttcaagtcggagaatggagcggtg
ctggtcttcgagcccatatccggttctttgaagatgagcgtcgtgcaccggagcgtcttt
gccgggcagaaacgccgctcgaaactggcgcgcgagaaggcagcggaggagattgcgtcg
tggctacggagttgcccccctagcgagcgtccgagcaagatcatcgtcacccgctcccgc
ttccgccagacgctacataacatgttggtgctcgactacccaaacatcatcatcggccaa
agcgatttgaacctgccgttgccgatggctctgcgccatagtcgcctcgttgagctgcgc
atcgcggcaatggaaagcaaagggtgggagttctgcatctacgatgactggcagcagagc
ctgcagttccagccgattacgtgtttcaacttgctgaacttggtcctgcgtggttaccac
gtcaacctgcagcgcacccggcagattctagtgcctgacttacatgtggaggtgggtgcg
gctcacttctggccgacatacgcgacccgccaggaatgggagcaggtgtccatccggctc
caggagatgatcatcgccgacgctgctcgacgcatgaatgtgagcccgaaggacttcact
gaaaaggagaaggagggcattctcctgggcaagcgcatgaccaacgtggagatccagcag
gaagagatgaaagagattgaggccatgaggcgcacgaaactctcagaggctcagacggtt
aacgttgtcacgagcagcggcgacgtcacaaagcgcaaggtgaaggcggccttcgatttt
ggtgcagcggcgctaaacaacaactggcgtccccgctccctggctgatgctgtctttctg
gatgagaacaccaccatcaccttcgacgccgccggcgccactggggcaagcgaccagctc
atcttctccgaggacgcagttcagaaattgctggcgtgctgcgacgttaaggtgcagtgc
tgcgcatacatgtttggtcatgcgctgccggactcgccaaacatcaaggaggtgctgtgc
atcatgattccaccacagtttggaacggccgtggaggcccgcacaccgccacgcattcca
tttgatgcaccggcgttgcaggaggcgaacctctccttcctggggctcatgaggattggc
gagagtgaggcgcagctgacctcacacgacctcgcactccaggcgcgtgcgttgatcgcc
aacgaggagatggtgccgcaagggtttctgactgccgttctagaaatgtcagtggagggg
gtgatggcgcggtgctacagcaccaccgcagaaggtatcgcgtgggcgcagaaggagtac
gaggggctgctgaagaagatcccagcagcgaccgacccggccttttctaccccgtgccgt
ggcacgctttcctcagaagcacgcagcttctttttggtgcctgtagagcgagcctggaac
tactacttcaaaggggcactatggcgtgagaacaccgaatacgatgtcgtcgttgacgtg
ccactgactttcttcgatgcgctgcaccgcccggaccacttcctcaactttattcgcatg
ggtgacgacgccgacgcgattgatgaggcggatcccaacgacttgttcgggaacgaagtc
ggcgtgggcggggagtga
DBGET
integrated database retrieval system
