Porcisia hertigi: 94287994
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Entry
94287994 CDS
T10408
Symbol
JKF63_01873
Name
(RefSeq) hypothetical protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
phet Porcisia hertigi
Pathway
phet03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
phet03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
94287994 (JKF63_01873)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
94287994
NCBI-ProteinID:
XP_067754074
UniProt:
A0A836HJS7
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Position
34:1271848..1274073
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AA seq
741 aa
AA seq
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MSSRGSDVTLPLTKDVVAAVFGSVKEYSRLSAQIPADDYDYHLAFPGFRKHIRDDSETLV
AVMDACTQMLPRRRRASLSWEEDPRSSAVHLPETQRTAVMEAIDSLLENVDSLLDEVKGR
KLDARGQLSVTFGSELAASPHREGGTGAPAAAAAAHGGVVRLAHVRRPQLLFDTPPDNSP
TPFVPHYCDASGQYHTGVAGQHPFEAVIKAFAIPQSQLLPRAEVPPVPLDTCPLTFVDTP
ATLQDMVKKLLLASEIAVDLEHHDFYSYQGFTCLMQISTREEDFIVDCLQLRSSMGALAP
VFLNPAILKVLHGAREDIRWLQKDFSLYLVNFFDTGVALQTLHMPYSLAFAVDHFCQVKL
NKKYQTADWRVRPLSAEMVHYARQDTHFLLYVYDRLKALLVNSEGRASIGSLLVHVYNES
KQLSLQVYEKPNVVPGETYKIALGRSLSGLSNVQERVAREVFNWRESAAREVDDSPTAVL
HLSSVLAIASRLPTTAKELLRCCAPATAVLRDNVAFLVKLVKDAVASGEHDASMKAHSTL
NEDGVNQDVDDGAMKAANREWAFYRSLCPTGVHRPMTGTLPSLASGVKTVASAEVSQAER
SSLLSHTTPSPWFTAMQTLSRALATRSHQHVELPGAELFAARQAAAATSITAAQGAKVDA
EEENKIGSVASSRSTSVSDVASEGRERDVSTADAPTTPHISLESVSSAPVDERAFSIKQE
YRIGTKGQPKRGGKGKARLKK
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccaggggcagtgatgttacgcttcctttaacaaaggatgttgtagccgccgtc
ttcgggtctgtaaaggagtacagtagactttcagcccagatacccgcggacgactacgat
taccacttggcctttccgggattccgcaaacacatccgcgatgatagtgaaactcttgtt
gcggtcatggatgcatgcacgcagatgttaccgaggcggcggcgcgccagcctctcttgg
gaggaggatccgcgtagcagcgccgtgcaccttcctgagacacagcgcactgcagtgatg
gaggccatcgactcgctactagaaaacgtcgactcccttttggatgaggtgaaagggcgc
aaactggacgcccgggggcagctttctgtcacctttggctccgagctggcggcttcgccg
catcgggaagggggcacaggtgctcctgcggctgcagctgcagcccacggaggtgtcgtg
cgattggctcatgtacggcgtccgcaactgttgttcgacaccccaccggataactcaccg
accccgtttgtgccccattactgcgacgcatctggacagtatcacactggggtagcgggt
cagcacccctttgaggcggtgatcaaggcctttgcgatcccgcaatcgcagcttctgccg
cgtgccgaggttccgccagtgccgctagatacctgcccacttacctttgtggatacccca
gcgacactgcaggatatggttaagaaactgttgctggcgagcgagatcgctgtagatttg
gagcatcacgacttctacagttatcagggattcacatgcctcatgcaaatcagtactcgt
gaagaggacttcatcgtggactgtctgcagctacgctcctcaatgggtgcgctggcacct
gtgtttcttaaccctgcgattctcaaagtgctgcacggcgcgcgagaggatattcggtgg
cttcagaaagacttctccctctacttggtgaacttctttgacacaggcgtggcgttgcag
acacttcacatgccctacagcctcgcctttgcagtcgatcacttctgccaggtaaagttg
aacaaaaaataccaaacggctgactggcgtgtacggccgctgtcagcagaaatggtgcac
tacgcgcggcaggatacacattttcttctgtacgtatatgacaggttgaaggcgcttctc
gtgaacagcgagggccgtgcaagcatcggcagcttgctcgtgcacgtctacaacgagagc
aagcagctctccctacaagtgtacgagaagcccaacgtggtgccaggggaaacgtacaaa
atcgcccttggtcggagtcttagtggactaagcaatgtccaggaaagagtggcgcgtgaa
gtgtttaactggcgggaatcggcggcgcgtgaggtcgatgattcccctacggctgtgttg
catctctcctctgtcttggccattgcctccaggcttccaacgacagccaaggagctgttg
cgatgctgcgcgccagccacggcggtcctacgcgacaatgttgccttcctcgtaaagctg
gtcaaggacgccgtagcgagtggcgagcatgacgcgtcgatgaaagcacactcgacattg
aacgaggatggtgtaaaccaggacgtagacgatggagcgatgaaggcggccaatagggag
tgggccttttatcgctccctttgccccacaggtgtgcaccgcccaatgacgggaacgctg
ccatctttggcaagtggagtaaagaccgtggcctcagctgaggtgtcgcaggcggagcgc
tcctctctgctttcgcacacgacaccgtcaccatggttcactgccatgcagactctgtcg
cgtgcccttgccacccgttcccatcagcacgttgagcttcccggcgctgaactgtttgct
gctcgccaggcagcagctgcaacctccataaccgcggcccagggtgcaaaggtagatgca
gaggaggaaaacaagatcggctcagtcgctagcagtcgcagcaccagcgtcagcgacgtg
gcatcagagggcagagagagagacgtgtcgaccgccgacgcccccaccacgccacatatt
tcgcttgaatccgtgtccagcgcaccggttgacgagcgtgccttctccatcaagcaggag
tacagaattgggaccaagggacagccaaagagaggcggtaagggaaaggcacggctgaag
aagtag
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