Porcisia hertigi: 94288029
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Entry
94288029 CDS
T10408
Symbol
JKF63_01908
Name
(RefSeq) hypothetical protein
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
phet Porcisia hertigi
Pathway
phet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
94288029 (JKF63_01908)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phet03021
]
94288029 (JKF63_01908)
03019 Messenger RNA biogenesis [BR:
phet03019
]
94288029 (JKF63_01908)
Transcription machinery [BR:
phet03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
94288029 (JKF63_01908)
Messenger RNA biogenesis [BR:
phet03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
94288029 (JKF63_01908)
U7-dependent histone pre-mRNA processing factors
94288029 (JKF63_01908)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B
Lactamase_B_6
Anti-Pycsar_Apyc1
CPSF73-100_C
RMMBL
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
94288029
NCBI-ProteinID:
XP_067754109
UniProt:
A0A836L0T7
LinkDB
All DBs
Position
34:<1384076..>1386346
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AA seq
756 aa
AA seq
DB search
MAAPLLPEVDTAAAPASLRSNAQDEVEVLPIGSGGEVGRSCVVVRYKGRGVMLDCGNHPA
KSGLDSLPFFDSIKCDEIDVVLITHFHLDHCGALPYFCNQTSFKGRIFMTSATKAFYKMV
MNDFLRIGAGASDLVTSEWLQSTIDRIETVEYHEEVTVNGISFQPFNAGHVLGAAMFMVD
IAGMRALYTGDFSRVPDRHLLGAEVPPYSPDILIAESTNGIRELESREEREHLFTSSVHD
VVRRGGRCLVPVFALGRAQELLLILEEYWDAHKELQNIPIYYASSLAQRCMKLYQTFVSA
MNDRVKQQHANHHNPFVFKYIHSLVDTKSFEDNGPCVVLASPGMLQSGISLELFERWCGD
RRNGIIMAGYCVDGTIAKDVLAKPKEVTKPDGKVLPLRMSTIEAVSFSAHSDGRQTRDFI
HHLTKVKHTILVHGNPGAMGQLKNKLLQDFRDRNMSVYTTMNQESIRIPFVQERTAKVMG
KLANISLREGEFVSGVMLVSGQHQYSIVHPDDVPVFTDLSVNRVQQAMVLPLPRHRSPLE
VLQVLQRYFAQSKMFEDVAPRPSNPEEAAEAHRVAAERGEVRDPDTRQLYVSKDVTVDVH
KSSQAQTTLTITWYSSHYNDLLADVTCIALAKLAEEPHEAEGEDVLVPADVSSQDRIFRV
KCFHYMISQFYPSVKTNLSSGSCSITLPDGQVANIVDCIEVYLERSTGKKDVDYDAPEVQ
KLKQILKRIYLTLFPIPVDNGWCDCGMIHGEEPVAE
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaccattgctccctgaggtggacaccgctgcagcgccagcgtcccttcgctcc
aatgcccaagatgaagtggaagtgctgccaatcggcagcggcggcgaggtgggtcgatcc
tgcgtggtggtgcggtacaaggggcgcggtgtcatgctggactgcggaaaccaccccgcg
aaaagtggccttgactctcttcccttttttgacagcatcaagtgcgatgagatcgatgtg
gtgctcatcacgcattttcacctagaccattgcggtgcgctgccgtacttctgtaatcag
acgtccttcaagggtcgcatcttcatgactagcgctaccaaggccttctacaagatggtc
atgaacgacttcttgcgcatcggcgctggggctagtgacctcgtcacaagcgagtggttg
cagagcacgattgaccgcatcgagacggtcgagtaccatgaagaggtcaccgtgaatggc
atctcctttcagccgttcaacgccggccacgtccttggggcagccatgtttatggtggat
atcgccggcatgcgtgcactgtacaccggcgacttctcgcgagtaccggaccgccacctg
ctaggggcggaggtgccgccgtattcacccgacatcctgattgcggagagcacaaacggc
atccgcgaactcgagtcccgtgaagagcgcgagcatcttttcacgagtagtgttcatgac
gtcgttcgccgcggtggtcgctgtctggtgccagtttttgccttaggccgtgcgcaggaa
ctgctgctcattctcgaagagtactgggatgcacacaaggagctgcagaacatccccatc
tactacgcctcctccctggcgcagcggtgcatgaaactctaccaaaccttcgtaagcgcc
atgaatgaccgtgtgaaacagcagcacgccaaccaccacaaccccttcgtcttcaagtac
atccactcgcttgtggacacaaagtcctttgaggacaacggcccctgcgtggtgctggcc
tcgccaggcatgcttcagtccggtatctcgctggagttgtttgagcgttggtgtggtgac
cggcgcaacggcatcattatggctggatactgcgttgatggcaccattgcaaaggacgtg
ctcgcgaagccgaaggaagtgacgaagccggatggcaaagtcctaccgctgcgcatgagc
accatcgaggccgtctccttctccgcccattccgacggtcggcagacacgcgacttcatt
caccatctcaccaaggtgaagcacacaatactggttcacggcaaccctggtgccatgggg
caactcaagaacaagctccttcaggacttccgtgaccgcaacatgtctgtttatacgact
atgaaccaagagtcaatacgtattccgtttgtgcaggagcgcaccgcgaaggtcatgggc
aagctggcgaacataagcctacgcgagggtgagtttgtaagcggggtgatgcttgtgtcg
ggccagcaccagtacagtattgtccaccccgacgatgtcccggtgttcactgacttgagc
gtgaaccgcgttcagcaggccatggttctcccgctcccacgccaccgctccccactggaa
gtgctgcaggtgctccagcggtacttcgcgcagagcaaaatgtttgaggatgtggcgccg
cgtccgtccaatcccgaggaggcggcagaggctcaccgggtggctgccgagcgtggtgag
gtgcgcgaccccgacacgaggcaactgtacgtctccaaagatgtcaccgttgacgtgcac
aaaagctcgcaggcgcaaacgacgctcaccatcacgtggtacagcagtcactacaacgac
ctccttgctgatgtcacgtgcatcgcgcttgccaagcttgcggaggagcctcatgaggcc
gaaggagaggacgtgctagtgcctgccgacgtctctagccaggaccgtatcttccgtgtc
aagtgcttccactacatgatctcccagttttacccatccgtcaagacgaacttgtcatcg
ggcagctgcagtatcacccttccggatggccaggtcgcaaacatcgtagactgcattgaa
gtttacttggagcgcagcactggcaagaaggacgtggactacgatgcgccagaggtacag
aaactgaagcagatcctcaagcgcatttatctgacgttgtttcctattccagtggacaac
ggctggtgcgattgcggcatgattcacggagaagaaccggtggcagagtaa
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