KEGG   Porcisia hertigi: 94288591
Entry
94288591          CDS       T10408                                 
Symbol
JKF63_02489
Name
(RefSeq) hypothetical protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
phet  Porcisia hertigi
Pathway
phet03020  RNA polymerase
phet03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:phet00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    94288591 (JKF63_02489)
  09124 Replication and repair
   03420 Nucleotide excision repair
    94288591 (JKF63_02489)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phet03021]
    94288591 (JKF63_02489)
   03019 Messenger RNA biogenesis [BR:phet03019]
    94288591 (JKF63_02489)
   03400 DNA repair and recombination proteins [BR:phet03400]
    94288591 (JKF63_02489)
Transcription machinery [BR:phet03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     94288591 (JKF63_02489)
Messenger RNA biogenesis [BR:phet03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     94288591 (JKF63_02489)
DNA repair and recombination proteins [BR:phet03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      94288591 (JKF63_02489)
SSDB
Motif
Pfam: SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 94288591
NCBI-ProteinID: XP_067754671
UniProt: A0A836I9L5
LinkDB
Position
32:510842..511441
AA seq 199 aa
MFYKVVLQRTVNVKPTDLCNTLNRSLLTFLREAVEGKPLPSPDSIASIALDFTSATKSSA
MVIAVLDILNAETLQGKVLDDGSVSFRLTYEAMVLKLHRGEVLDLLVSDVDETGFWASVY
GVNKLFVNRNQMGEDAQRGKSEWSFEAETAAWVSHDDRRSIKKDTMVRLRVIAETPQSER
GMAVGTIGAPFLGPRVGSY
NT seq 600 nt   +upstreamnt  +downstreamnt
atgttctacaaggtcgtccttcagcgcacggtgaatgtaaagcctacggatctgtgcaat
acactcaatcgcagtcttctcaccttcttgcgggaggcagtcgagggaaagccacttcca
tcccccgacagtatcgccagcatagcactggacttcacttcagcgaccaagtcttctgcg
atggtgatcgctgtgcttgatatcctcaatgctgagacgctgcaaggcaaggtgctcgat
gatggcagtgtgtccttccgacttacttatgaggcgatggtgctgaagctgcaccgcggt
gaggtgctcgatctgctggtgagtgacgtggacgagacaggcttctgggcgagtgtctat
ggtgttaataagctctttgtgaaccgaaaccagatgggcgaggacgcgcaaagaggaaaa
tcggagtggtcatttgaagcggagacggctgcgtgggtcagtcatgacgatcgccgctct
atcaaaaaggatacaatggtgcgactgcgagtgattgcggagacgccgcaatccgaacga
ggtatggcggttggcaccatcggcgccccgtttttaggtccgcgtgtaggcagttattag

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