Porcisia hertigi: 94288591
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Entry
94288591 CDS
T10408
Symbol
JKF63_02489
Name
(RefSeq) hypothetical protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
phet Porcisia hertigi
Pathway
phet03020
RNA polymerase
phet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phet00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
94288591 (JKF63_02489)
09124 Replication and repair
03420 Nucleotide excision repair
94288591 (JKF63_02489)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phet03021
]
94288591 (JKF63_02489)
03019 Messenger RNA biogenesis [BR:
phet03019
]
94288591 (JKF63_02489)
03400 DNA repair and recombination proteins [BR:
phet03400
]
94288591 (JKF63_02489)
Transcription machinery [BR:
phet03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
94288591 (JKF63_02489)
Messenger RNA biogenesis [BR:
phet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
94288591 (JKF63_02489)
DNA repair and recombination proteins [BR:
phet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
94288591 (JKF63_02489)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
94288591
NCBI-ProteinID:
XP_067754671
UniProt:
A0A836I9L5
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All DBs
Position
32:510842..511441
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AA seq
199 aa
AA seq
DB search
MFYKVVLQRTVNVKPTDLCNTLNRSLLTFLREAVEGKPLPSPDSIASIALDFTSATKSSA
MVIAVLDILNAETLQGKVLDDGSVSFRLTYEAMVLKLHRGEVLDLLVSDVDETGFWASVY
GVNKLFVNRNQMGEDAQRGKSEWSFEAETAAWVSHDDRRSIKKDTMVRLRVIAETPQSER
GMAVGTIGAPFLGPRVGSY
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgttctacaaggtcgtccttcagcgcacggtgaatgtaaagcctacggatctgtgcaat
acactcaatcgcagtcttctcaccttcttgcgggaggcagtcgagggaaagccacttcca
tcccccgacagtatcgccagcatagcactggacttcacttcagcgaccaagtcttctgcg
atggtgatcgctgtgcttgatatcctcaatgctgagacgctgcaaggcaaggtgctcgat
gatggcagtgtgtccttccgacttacttatgaggcgatggtgctgaagctgcaccgcggt
gaggtgctcgatctgctggtgagtgacgtggacgagacaggcttctgggcgagtgtctat
ggtgttaataagctctttgtgaaccgaaaccagatgggcgaggacgcgcaaagaggaaaa
tcggagtggtcatttgaagcggagacggctgcgtgggtcagtcatgacgatcgccgctct
atcaaaaaggatacaatggtgcgactgcgagtgattgcggagacgccgcaatccgaacga
ggtatggcggttggcaccatcggcgccccgtttttaggtccgcgtgtaggcagttattag
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integrated database retrieval system