Porcisia hertigi: 94288809
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Entry
94288809 CDS
T10408
Symbol
JKF63_02708
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
phet Porcisia hertigi
Brite
KEGG Orthology (KO) [BR:
phet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phet03016
]
94288809 (JKF63_02708)
Enzymes [BR:
phet01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
94288809 (JKF63_02708)
Transfer RNA biogenesis [BR:
phet03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
94288809 (JKF63_02708)
Prokaryotic type
94288809 (JKF63_02708)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
94288809
NCBI-ProteinID:
XP_067754889
UniProt:
A0A836IFF1
LinkDB
All DBs
Position
32:1328741..1331833
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AA seq
934 aa
AA seq
DB search
MLQACGITAFLTPLPSIARSSATCVDGTRLSAAATDCATTSVQCATGDIKGVPEDFVVVE
VDPARQRTDAENYKFSSAIVSDDPQPAQDHLMGDEAEEGLLAGHDGALSPLPVMLPRHDR
MLGTCSRSAQALQDILSTHTRELERFFGTATEVAARASSTFTQATLSVLLRDIRGAAQGN
LLVHSEAESSPLWWRRAAHTLGRFPNKQERQLLHLIVRRRFPHLGTCADAPVSPSVASGT
SSGSDDASVVSCFLNLHYVLFCATLGNEAALCIARWSVEAQAARHERKWSDEMCAELHQL
FDCEDKEVWAASRAHKSASAKGLCNTSFDSLTEAMRRQPFDKWAVCVEAESMPLVSDKDV
RRQVHELLRRFYPFVNCQVREGHVTLRMRSHSDRSGHKPTCDGTAHPTNTSGTGVGARRT
RAAMEADSADASTASATPVSKRATPAYVHIIVKKRNLETAEMRQLLGEYFGVRDGAVCIA
GMKDKKAVSVQRCSVPVAATEEAQNRVHALLGDATAACPVTLRWPADPQQSYAVLLRAAP
FNAPIQLGQLSGNWFSLRLRGVRWASEEDRKMWGSSLKTTAVNGTASAVTCEGAPQPLRD
FIQCRFERCVEIGFINYFGQQRFSEAIERVSDHTGVHLFAARWVAAVRSLYRACPDVYNA
FPEKMEARFVPSNLRDAQVMTHALRQTYRMYFSQHPLHHADVQMESEVWTCLCEKAITEG
VPFYLRSLWVHAGQSAFFNCAASYAVSKWMAEVSSAAVVPHQDANGEHQVAEAAAHTKTE
DPTWEKSPASLALEVLASAELPLGGYQGNRMAPNTPHSSDPALTTLWTQVKDAAIQHALR
ELHWTSEQGFGQRRVAGVPVPGSWRAVVARPTHASFQWEAPASSTIQQKLPSDDGGDGSS
DAMNHSTLHLSFFLPLSCYATVFLREVLGCDKWW
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgctacaagcatgtggtatcaccgcgtttcttacgcccttgccttccatcgcacgctcg
tctgcaacatgcgtggacggcactcggctgagtgctgcagcgacggactgtgccacgacg
tcagtacagtgcgccaccggtgacatcaagggtgtgccagaggacttcgtggtagttgag
gtggatccggcaaggcaacgcaccgatgcagaaaactacaaattttcttctgcgatcgta
tccgatgacccacagcccgctcaagatcacctgatgggtgatgaggccgaagagggccta
cttgccggacacgacggtgcgctcagcccacttccagtcatgttgcctcggcacgaccgg
atgctgggaacctgttcgcgttccgcgcaagcgctgcaagatatactctctacgcataca
cgagaactagagcgtttctttgggaccgccaccgaggtggcggcgcgtgcgtcgtctacg
ttcactcaagctactctctccgtgcttcttcgcgacatccgcggcgctgctcaaggcaac
ttgcttgtgcattctgaggcggagtcgagtccactgtggtggcgcagggcggcgcacacg
ctaggccgtttcccgaacaagcaagagcggcaactgctgcatttgatagtgcgtcgccgt
ttccctcacctcggcacctgtgccgatgcgccggtgtccccatctgtcgccagcggcacc
tcgtcaggcagtgacgacgcttctgtagtctcgtgcttcttgaacttgcactatgtcctg
ttttgcgctacgctcgggaatgaggcggcgctctgcatagcgcggtggtcagtggaggca
caagcagcgcgccacgagcggaagtggagcgatgagatgtgtgcggagttgcatcagctc
ttcgactgcgaggacaaggaggtttgggctgcttccagggcgcataagagtgcgtcagcc
aagggactctgcaacacctctttcgattcattgacagaagcgatgcggcggcagccattc
gataagtgggcagtgtgtgttgaagcagagtcaatgccgctcgtgtctgacaaggatgtg
cggcgacaggtgcacgagctgcttcgccgattttacccctttgtgaactgccaagtgcgt
gaggggcatgtcaccctccgtatgcgctcccactcagatcgcagcggccacaaacctact
tgtgatggcactgcgcacccaacgaacaccagcggcaccggtgtcggggctcggcggacc
cgcgcggcaatggaggctgactcagccgacgcatccacagcgtcggctacaccggtgtcc
aagagggctactccggcatacgtgcacatcattgtgaagaagcgaaatctggagaccgcg
gagatgcgacagctgctgggcgagtacttcggcgtgagggacggtgcggtttgtatcgcg
ggcatgaaggacaaaaaggcggtgtcggtgcagcggtgctccgttcccgtggctgccacg
gaagaagcacagaatcgtgtccacgcgctcttgggggatgccacagctgcttgccccgtc
acgctgcgctggccagcagacccacagcaaagctacgctgtcctcctccgcgcagctccc
ttcaatgcgcccattcagctggggcagctctcaggaaactggttctcgctacgtcttcgt
ggcgtgcggtgggcaagtgaggaggatcgaaagatgtgggggtcgtcgttgaagacgacc
gccgtgaacggcacagcatccgcggtgacgtgcgaaggcgcaccgcaaccgctgcgtgac
ttcatccaatgccgttttgagcgctgtgtagagataggtttcatcaattactttggccag
cagcgcttcagtgaggcgatcgagcgcgtcagtgatcacactggcgtccacctcttcgcc
gctcgatgggtagcagcggtccgaagtctgtatcgtgcgtgtcccgacgtttacaatgcc
tttcctgaaaagatggaggcgcgcttcgtgccgagcaacctgcgtgacgcacaggtcatg
acgcatgctcttcggcaaacgtatcgcatgtacttctcgcaacaccctctccaccatgcc
gacgtgcagatggagagtgaggtgtggacatgtctctgcgagaaggccatcaccgaaggc
gtcccattttacctcagatccctctgggtgcacgctggacaaagtgctttctttaactgc
gcggcctcctacgcggtgtcaaagtggatggcagaggtttcatcagcagcggtggtaccg
caccaagacgccaatggtgagcaccaggtcgctgaggcggcagcccacacgaagacggag
gaccccacatgggagaaatcacccgcatcgctcgcccttgaggttcttgcgagcgcggag
ctgccgcttggcggataccaagggaaccgcatggcccccaacaccccgcactctagcgac
cccgcgttgaccacgctgtggacgcaggtgaaggatgcagccatccagcacgccttgcgg
gagctgcattggacctcggaacaggggtttggacagcgtcgtgtggctggggtgcctgtg
cctggctcatggcgtgcagtagttgcacgacccacccatgcgtctttccagtgggaagca
ccagcgagctccacgatccagcagaagcttcccagcgatgatggcggggatggtagctca
gacgcgatgaaccattctacattacatctctctttttttttgcccttgtcatgctacgcc
accgtctttcttcgagaggtgctcggctgcgacaagtggtggtga
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